RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	SCAF8	Q9UPN6	1271 aa	Known RBP	32.16	■■■□□ 2.74
CYLD-208	ENST00000564634	G2E3	Q7L622	706 aa		32.15	■■■□□ 2.74
CYLD-208	ENST00000564634	RASAL3	Q86YV0	1011 aa		32.15	■■■□□ 2.74
CYLD-208	ENST00000564634	CSRNP1	Q96S65	589 aa		32.15	■■■□□ 2.74
CYLD-208	ENST00000564634	METTL22	Q9BUU2	404 aa	Predicted RBP	32.15	■■■□□ 2.74
CYLD-208	ENST00000564634	XDH	P47989	1333 aa		32.15	■■■□□ 2.74
CYLD-208	ENST00000564634	PAPPA2	Q9BXP8	1791 aa		32.14	■■■□□ 2.74
CYLD-208	ENST00000564634	SOX10	P56693	466 aa		32.14	■■■□□ 2.74
CYLD-208	ENST00000564634	ANKRD18A	Q8IVF6	992 aa		32.14	■■■□□ 2.74
CYLD-208	ENST00000564634	MAP3K2	Q9Y2U5	619 aa		32.14	■■■□□ 2.74
CYLD-208	ENST00000564634	SPEF2	Q9C093	1822 aa		32.14	■■■□□ 2.74
CYLD-208	ENST00000564634	PI4KAP2	A4QPH2	592 aa		32.13	■■■□□ 2.73
CYLD-208	ENST00000564634	PI4KAP1	Q8N8J0	262 aa		32.13	■■■□□ 2.73
CYLD-208	ENST00000564634	MYOZ2	Q9NPC6	264 aa		32.13	■■■□□ 2.73
CYLD-208	ENST00000564634	USP17L8	P0C7I0	530 aa		32.12	■■■□□ 2.73
CYLD-208	ENST00000564634	FLII	Q13045	1269 aa		32.12	■■■□□ 2.73
CYLD-208	ENST00000564634	GML	Q99445	158 aa		32.12	■■■□□ 2.73
CYLD-208	ENST00000564634	CDCA7L	Q96GN5	454 aa		32.11	■■■□□ 2.73
CYLD-208	ENST00000564634	USP17L3	A6NCW0	530 aa		32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	USP17L4	A6NCW7	530 aa		32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	WTIP	A6NIX2	430 aa	Predicted RBP	32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	ATP2B4	P23634	1241 aa		32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	MOB2	Q70IA6	237 aa		32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	USP17L1	Q7RTZ2	530 aa		32.1	■■■□□ 2.73
CYLD-208	ENST00000564634	TRMT2A	Q8IZ69	625 aa	Known RBP	32.09	■■■□□ 2.73
CYLD-208	ENST00000564634	PITPNM2	Q9BZ72	1349 aa		32.08	■■■□□ 2.73
CYLD-208	ENST00000564634	CTSW	P56202	376 aa		32.08	■■■□□ 2.73
CYLD-208	ENST00000564634	NEXN	Q0ZGT2	675 aa		32.08	■■■□□ 2.73
CYLD-208	ENST00000564634	FKBP5	Q13451	457 aa	Predicted RBP	32.08	■■■□□ 2.73
CYLD-208	ENST00000564634	PRAMEF18	Q5VWM3	479 aa		32.07	■■■□□ 2.72
CYLD-208	ENST00000564634	FBXW7	Q969H0	707 aa		32.07	■■■□□ 2.72
CYLD-208	ENST00000564634	MXD3	Q9BW11	206 aa		32.07	■■■□□ 2.72
CYLD-208	ENST00000564634	FKBP1B	P68106	108 aa		32.06	■■■□□ 2.72
CYLD-208	ENST00000564634	PODN	Q7Z5L7	613 aa		32.06	■■■□□ 2.72
CYLD-208	ENST00000564634	CDC5L	Q99459	802 aa	Known RBP	32.06	■■■□□ 2.72
CYLD-208	ENST00000564634	CTU1	Q7Z7A3	348 aa	Known RBP	32.05	■■■□□ 2.72
CYLD-208	ENST00000564634	MED23	Q9ULK4	1368 aa		32.05	■■■□□ 2.72
CYLD-208	ENST00000564634	ZNF646	O15015	1829 aa	Predicted RBP	32.05	■■■□□ 2.72
CYLD-208	ENST00000564634	UBE2Q2L	H0YL09	131 aa		32.04	■■■□□ 2.72
CYLD-208	ENST00000564634	NBPF9	Q3BBW0	867 aa		32.04	■■■□□ 2.72
CYLD-208	ENST00000564634	MYH3	P11055	1940 aa		32.04	■■■□□ 2.72
CYLD-208	ENST00000564634	IGKV5-2	P06315	115 aa		32.03	■■■□□ 2.72
CYLD-208	ENST00000564634	REM2	Q8IYK8	340 aa	Predicted RBP	32.03	■■■□□ 2.72
CYLD-208	ENST00000564634	DNAAF4	Q8WXU2	420 aa		32.03	■■■□□ 2.72
CYLD-208	ENST00000564634	GREM2	Q9H772	168 aa		32.03	■■■□□ 2.72
CYLD-208	ENST00000564634	TTLL12	Q14166	644 aa	Predicted RBP	32.02	■■■□□ 2.72
CYLD-208	ENST00000564634	MINPP1	Q9UNW1	487 aa		32.02	■■■□□ 2.72
CYLD-208	ENST00000564634	TTLL11	Q8NHH1	800 aa		32.01	■■■□□ 2.71
CYLD-208	ENST00000564634	DACT2	Q5SW24	774 aa		32	■■■□□ 2.71
CYLD-208	ENST00000564634	BSDC1	Q9NW68	430 aa	Predicted RBP	32	■■■□□ 2.71
CYLD-208	ENST00000564634	NEURL1B	A8MQ27	555 aa		31.99	■■■□□ 2.71
CYLD-208	ENST00000564634	CCT4	P50991	539 aa	Known RBP	31.99	■■■□□ 2.71
CYLD-208	ENST00000564634	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.99	■■■□□ 2.71
CYLD-208	ENST00000564634	MKRN3	Q13064	507 aa	Known RBP	31.99	■■■□□ 2.71
CYLD-208	ENST00000564634	SASH1	O94885	1247 aa		31.98	■■■□□ 2.71
CYLD-208	ENST00000564634	TBC1D8	O95759	1140 aa		31.98	■■■□□ 2.71
CYLD-208	ENST00000564634	CWF19L2	Q2TBE0	894 aa	Known RBP	31.98	■■■□□ 2.71
CYLD-208	ENST00000564634	PDE4DIP	Q5VU43	2346 aa		31.98	■■■□□ 2.71
CYLD-208	ENST00000564634	CT47B1	P0C2W7	299 aa	Predicted RBP	31.97	■■■□□ 2.71
CYLD-208	ENST00000564634	OGFOD1	Q8N543	542 aa		31.97	■■■□□ 2.71
CYLD-208	ENST00000564634	WNT10B	O00744	389 aa		31.96	■■■□□ 2.71
CYLD-208	ENST00000564634	MRPL50	Q8N5N7	158 aa	Known RBP	31.96	■■■□□ 2.71
CYLD-208	ENST00000564634	LINS1	Q8NG48	757 aa		31.96	■■■□□ 2.71
CYLD-208	ENST00000564634	HPS5	Q9UPZ3	1129 aa		31.96	■■■□□ 2.71
CYLD-208	ENST00000564634	TXNRD3	Q86VQ6	643 aa		31.95	■■■□□ 2.71
CYLD-208	ENST00000564634	ZNF296	Q8WUU4	475 aa	Predicted RBP	31.95	■■■□□ 2.71
CYLD-208	ENST00000564634	HDAC9	Q9UKV0	1011 aa		31.95	■■■□□ 2.71
CYLD-208	ENST00000564634	ALDH1L2	Q3SY69	923 aa		31.94	■■■□□ 2.7
CYLD-208	ENST00000564634	UBE3B	Q7Z3V4	1068 aa		31.94	■■■□□ 2.7
CYLD-208	ENST00000564634	MYO3B	Q8WXR4	1341 aa		31.94	■■■□□ 2.7
CYLD-208	ENST00000564634		F6X3S4	739 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	KLRK1	P26718	216 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	NF2	P35240	595 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	STRIP1	Q5VSL9	837 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	SSH1	Q8WYL5	1049 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	COA1	Q9GZY4	146 aa		31.93	■■■□□ 2.7
CYLD-208	ENST00000564634	PRKG1	Q13976	671 aa		31.92	■■■□□ 2.7
CYLD-208	ENST00000564634	GCKR	Q14397	625 aa		31.92	■■■□□ 2.7
CYLD-208	ENST00000564634		H7C1W4	665 aa		31.91	■■■□□ 2.7
CYLD-208	ENST00000564634	IGHMBP2	P38935	993 aa	Known RBP	31.91	■■■□□ 2.7
CYLD-208	ENST00000564634	BEND3	Q5T5X7	828 aa		31.9	■■■□□ 2.7
CYLD-208	ENST00000564634	KIAA0825	Q8IV33	1275 aa		31.9	■■■□□ 2.7
CYLD-208	ENST00000564634	LEMD3	Q9Y2U8	911 aa		31.89	■■■□□ 2.7
CYLD-208	ENST00000564634	ZNF804B	A4D1E1	1349 aa		31.89	■■■□□ 2.7
CYLD-208	ENST00000564634	PTPN12	Q05209	780 aa	Known RBP	31.88	■■■□□ 2.69
CYLD-208	ENST00000564634	TTLL5	Q6EMB2	1281 aa		31.88	■■■□□ 2.69
CYLD-208	ENST00000564634	PTPRC	P08575	1304 aa		31.88	■■■□□ 2.69
CYLD-208	ENST00000564634	ITGA6	P23229	1130 aa		31.87	■■■□□ 2.69
CYLD-208	ENST00000564634	TM4SF4	P48230	202 aa		31.87	■■■□□ 2.69
CYLD-208	ENST00000564634	PKN2	Q16513	984 aa	Known RBP	31.87	■■■□□ 2.69
CYLD-208	ENST00000564634	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.87	■■■□□ 2.69
CYLD-208	ENST00000564634	GPR25	O00155	361 aa		31.86	■■■□□ 2.69
CYLD-208	ENST00000564634	GTF2I	P78347	998 aa		31.86	■■■□□ 2.69
CYLD-208	ENST00000564634	ARMC9	Q7Z3E5	817 aa		31.86	■■■□□ 2.69
CYLD-208	ENST00000564634	SREBF2	Q12772	1141 aa		31.85	■■■□□ 2.69
CYLD-208	ENST00000564634	SLC4A10	Q6U841	1118 aa		31.85	■■■□□ 2.69
CYLD-208	ENST00000564634	MPHOSPH8	Q99549	860 aa		31.85	■■■□□ 2.69
CYLD-208	ENST00000564634	SMC4	Q9NTJ3	1288 aa		31.85	■■■□□ 2.69
CYLD-208	ENST00000564634	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	31.85	■■■□□ 2.69
CYLD-208	ENST00000564634	FZD1	Q9UP38	647 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms