RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 IQCA1LA6NCM1 817 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 RIMBP2O15034 1052 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 RPS12P25398 132 aaKnown RBP20.66■□□□□ 0.9
RNF40-206ENST00000564260 CAVIN4Q5BKX8 364 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 CIAPIN1Q6FI81 312 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 HELBQ8NG08 1087 aaPredicted RBP20.66■□□□□ 0.9
RNF40-206ENST00000564260 SIL1Q9H173 461 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 GPBP1L1Q9HC44 474 aaPredicted RBP20.66■□□□□ 0.9
RNF40-206ENST00000564260 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
RNF40-206ENST00000564260 PA2G4Q9UQ80 394 aaKnown RBP20.66■□□□□ 0.9
RNF40-206ENST00000564260 SLC5A1P13866 664 aa20.65■□□□□ 0.9
RNF40-206ENST00000564260 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
RNF40-206ENST00000564260 WDR90Q96KV7 1748 aa20.64■□□□□ 0.9
RNF40-206ENST00000564260 MYO3BQ8WXR4 1341 aa20.64■□□□□ 0.89
RNF40-206ENST00000564260 ZNF541Q9H0D2 1346 aa20.64■□□□□ 0.89
RNF40-206ENST00000564260 IL1R1P14778 569 aa20.64■□□□□ 0.89
RNF40-206ENST00000564260 CXCL9Q07325 125 aa20.64■□□□□ 0.89
RNF40-206ENST00000564260 DBNDD1Q9H9R9 158 aa20.64■□□□□ 0.89
RNF40-206ENST00000564260 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
RNF40-206ENST00000564260 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
RNF40-206ENST00000564260 ATP2B3Q16720 1220 aa20.63■□□□□ 0.89
RNF40-206ENST00000564260 STRIP1Q5VSL9 837 aa20.63■□□□□ 0.89
RNF40-206ENST00000564260 DPF2Q92785 391 aa20.63■□□□□ 0.89
RNF40-206ENST00000564260 CD209Q9NNX6 404 aa20.63■□□□□ 0.89
RNF40-206ENST00000564260 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
RNF40-206ENST00000564260 VIL1P09327 827 aaKnown RBP20.62■□□□□ 0.89
RNF40-206ENST00000564260 VEGFAP15692 232 aaPredicted RBP20.62■□□□□ 0.89
RNF40-206ENST00000564260 HIBADHP31937 336 aaKnown RBP20.62■□□□□ 0.89
RNF40-206ENST00000564260 FKBP1AP62942 108 aaKnown RBP20.62■□□□□ 0.89
RNF40-206ENST00000564260 DOK7Q18PE1 504 aa20.62■□□□□ 0.89
RNF40-206ENST00000564260 FBXO33Q7Z6M2 555 aa20.62■□□□□ 0.89
RNF40-206ENST00000564260 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 OS9Q13438 667 aaPredicted RBP20.61■□□□□ 0.89
RNF40-206ENST00000564260 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 TXNRD3Q86VQ6 643 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 VPS37DQ86XT2 251 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 SIRT2Q8IXJ6 389 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 AGBL3Q8NEM8 1001 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
RNF40-206ENST00000564260 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
RNF40-206ENST00000564260 CRBNQ96SW2 442 aa20.61■□□□□ 0.89
RNF40-206ENST00000564260 DDNO94850 711 aaPredicted RBP20.6■□□□□ 0.89
RNF40-206ENST00000564260 SASH1O94885 1247 aa20.6■□□□□ 0.89
RNF40-206ENST00000564260 WTIPA6NIX2 430 aaPredicted RBP20.59■□□□□ 0.89
RNF40-206ENST00000564260 SEMA3EO15041 775 aa20.59■□□□□ 0.89
RNF40-206ENST00000564260 RAD17O75943 681 aa20.59■□□□□ 0.89
RNF40-206ENST00000564260 KLRK1P26718 216 aa20.59■□□□□ 0.89
RNF40-206ENST00000564260 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
RNF40-206ENST00000564260 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
RNF40-206ENST00000564260 GNL3LQ9NVN8 582 aaKnown RBP20.59■□□□□ 0.89
RNF40-206ENST00000564260 FAM205AQ6ZU69 1335 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 SCN4AP35499 1836 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 SNAP23O00161 211 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 PSMD14O00487 310 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
RNF40-206ENST00000564260 TFCP2Q12800 502 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
RNF40-206ENST00000564260 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.89
RNF40-206ENST00000564260 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 HACL1Q9UJ83 578 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.89
RNF40-206ENST00000564260 PDS5AQ29RF7 1337 aaKnown RBP20.57■□□□□ 0.88
RNF40-206ENST00000564260 A0A1B0GUL7 405 aa20.57■□□□□ 0.88
RNF40-206ENST00000564260 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
RNF40-206ENST00000564260 TBC1D22AQ8WUA7 517 aa20.57■□□□□ 0.88
RNF40-206ENST00000564260 GYG1P46976 350 aa20.56■□□□□ 0.88
RNF40-206ENST00000564260 SCNN1DP51172 638 aa20.56■□□□□ 0.88
RNF40-206ENST00000564260 DACT2Q5SW24 774 aa20.56■□□□□ 0.88
RNF40-206ENST00000564260 GPRC5DQ9NZD1 345 aa20.56■□□□□ 0.88
RNF40-206ENST00000564260 PSME4Q14997 1843 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 IGSF3O75054 1194 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 HDAC1Q13547 482 aaPredicted RBP20.55■□□□□ 0.88
RNF40-206ENST00000564260 GMLQ99445 158 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 DCTPP1Q9H773 170 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 SUGT1Q9Y2Z0 365 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 ARAP2Q8WZ64 1704 aa20.55■□□□□ 0.88
RNF40-206ENST00000564260 POTECB2RU33 542 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 KIF3CO14782 793 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 GMPSP49915 693 aaPredicted RBP20.54■□□□□ 0.88
RNF40-206ENST00000564260 TNNI3KQ59H18 835 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 USP50Q70EL3 339 aaPredicted RBP20.54■□□□□ 0.88
RNF40-206ENST00000564260 RHPN1Q8TCX5 695 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
RNF40-206ENST00000564260 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
RNF40-206ENST00000564260 RRAGCQ9HB90 399 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 ADARB2Q9NS39 739 aaKnown RBP20.54■□□□□ 0.88
RNF40-206ENST00000564260 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 FPGT-TNNI3KV9GXZ4 949 aa20.54■□□□□ 0.88
RNF40-206ENST00000564260 H7C1D1 291 aa20.53■□□□□ 0.88
RNF40-206ENST00000564260 GTF2IP78347 998 aa20.53■□□□□ 0.88
RNF40-206ENST00000564260 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
RNF40-206ENST00000564260 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
RNF40-206ENST00000564260 XAGE2Q96GT9 111 aa20.53■□□□□ 0.88
RNF40-206ENST00000564260 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
RNF40-206ENST00000564260 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
RNF40-206ENST00000564260 PCDHB15Q9Y5E8 787 aa20.53■□□□□ 0.88
RNF40-206ENST00000564260 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms