RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 F6X3S4 739 aa21.9■■□□□ 1.1
VPS9D1-203ENST00000563798 MMP14P50281 582 aa21.9■■□□□ 1.1
VPS9D1-203ENST00000563798 MPHOSPH8Q99549 860 aa21.9■■□□□ 1.1
VPS9D1-203ENST00000563798 ZNF408Q9H9D4 720 aa21.9■■□□□ 1.1
VPS9D1-203ENST00000563798 ZNF804BA4D1E1 1349 aa21.89■■□□□ 1.1
VPS9D1-203ENST00000563798 DACT2Q5SW24 774 aa21.89■■□□□ 1.09
VPS9D1-203ENST00000563798 STRIP1Q5VSL9 837 aa21.89■■□□□ 1.09
VPS9D1-203ENST00000563798 DLK2Q6UY11 383 aa21.89■■□□□ 1.09
VPS9D1-203ENST00000563798 TXNRD3Q86VQ6 643 aa21.89■■□□□ 1.09
VPS9D1-203ENST00000563798 GGA3Q9NZ52 723 aa21.89■■□□□ 1.09
VPS9D1-203ENST00000563798 MYO3BQ8WXR4 1341 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 PITPNM2Q9BZ72 1349 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 ANKRD18BA2A2Z9 1011 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 ADM5C9JUS6 153 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 AOC2O75106 756 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 ALDH1L1O75891 902 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 MYOZ2Q9NPC6 264 aa21.88■■□□□ 1.09
VPS9D1-203ENST00000563798 ZNF646O15015 1829 aaPredicted RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 ASTN2O75129 1339 aaPredicted RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 GRM8O00222 908 aa21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 BRPF1P55201 1214 aaPredicted RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 HUNKP57058 714 aa21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 CHRNDQ07001 517 aa21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 SCARF1Q14162 830 aa21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 C15orf52Q6ZUT6 534 aaKnown RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 BEGAINQ9BUH8 593 aa21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 GBA2Q9HCG7 927 aaPredicted RBP21.87■■□□□ 1.09
VPS9D1-203ENST00000563798 IRS2Q9Y4H2 1338 aa21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 CA12O43570 354 aa21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 NOGQ13253 232 aa21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 GRM1Q13255 1194 aa21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 IFIT5Q13325 482 aaKnown RBP21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 C2orf69Q8N8R5 385 aa21.86■■□□□ 1.09
VPS9D1-203ENST00000563798 ANGEL2Q5VTE6 544 aaKnown RBP21.85■■□□□ 1.09
VPS9D1-203ENST00000563798 KLRK1P26718 216 aa21.84■■□□□ 1.09
VPS9D1-203ENST00000563798 EPHA10Q5JZY3 1008 aa21.84■■□□□ 1.09
VPS9D1-203ENST00000563798 FAM155AB1AL88 458 aaPredicted RBP21.83■■□□□ 1.09
VPS9D1-203ENST00000563798 RGMBQ6NW40 437 aa21.83■■□□□ 1.09
VPS9D1-203ENST00000563798 LMBR1LQ6UX01 489 aa21.83■■□□□ 1.09
VPS9D1-203ENST00000563798 CDCA5Q96FF9 252 aa21.83■■□□□ 1.09
VPS9D1-203ENST00000563798 SRCIN1Q9C0H9 1055 aa21.83■■□□□ 1.09
VPS9D1-203ENST00000563798 FKBP1BP68106 108 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 TTLL5Q6EMB2 1281 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 OGFOD1Q8N543 542 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 CCDC102AQ96A19 550 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 MXD3Q9BW11 206 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 CD209Q9NNX6 404 aa21.82■■□□□ 1.08
VPS9D1-203ENST00000563798 UTYO14607 1347 aa21.81■■□□□ 1.08
VPS9D1-203ENST00000563798 E9PSI1 815 aa21.81■■□□□ 1.08
VPS9D1-203ENST00000563798 CAPN15O75808 1086 aa21.81■■□□□ 1.08
VPS9D1-203ENST00000563798 KCNJ4P48050 445 aa21.81■■□□□ 1.08
VPS9D1-203ENST00000563798 C9orf78Q9NZ63 289 aaPredicted RBP21.81■■□□□ 1.08
VPS9D1-203ENST00000563798 CCDC57Q2TAC2 916 aa21.8■■□□□ 1.08
VPS9D1-203ENST00000563798 NBPF9Q3BBW0 867 aa21.8■■□□□ 1.08
VPS9D1-203ENST00000563798 MRPL50Q8N5N7 158 aaKnown RBP21.8■■□□□ 1.08
VPS9D1-203ENST00000563798 A0A1B0GUL6 1792 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 WNT10BO00744 389 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 TAF5LO75529 589 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 SLC4A10Q6U841 1118 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 KAZALD1Q96I82 304 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 ZBED3Q96IU2 234 aaPredicted RBP21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 ZIC5Q96T25 663 aa21.79■■□□□ 1.08
VPS9D1-203ENST00000563798 IL1R1P14778 569 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 GTF2IP78347 998 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 SLFN5Q08AF3 891 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 LDHAL6AQ6ZMR3 332 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 PTPRCP08575 1304 aa21.78■■□□□ 1.08
VPS9D1-203ENST00000563798 SNAP23O00161 211 aa21.77■■□□□ 1.08
VPS9D1-203ENST00000563798 SLC10A3P09131 477 aa21.77■■□□□ 1.08
VPS9D1-203ENST00000563798 ZNF157P51786 506 aaPredicted RBP21.77■■□□□ 1.08
VPS9D1-203ENST00000563798 HDAC9Q9UKV0 1011 aa21.77■■□□□ 1.08
VPS9D1-203ENST00000563798 NBPF7P0C2Y1 421 aaPredicted RBP21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 FKBP1AP62942 108 aaKnown RBP21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 RABL6Q3YEC7 729 aaPredicted RBP21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 FBXW7Q969H0 707 aa21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 SUCLG2Q96I99 432 aa21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 ZNF594Q96JF6 807 aaPredicted RBP21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 PAPPA2Q9BXP8 1791 aa21.76■■□□□ 1.07
VPS9D1-203ENST00000563798 ZNF804AQ7Z570 1209 aa21.75■■□□□ 1.07
VPS9D1-203ENST00000563798 KIAA0825Q8IV33 1275 aa21.75■■□□□ 1.07
VPS9D1-203ENST00000563798 MTMR14Q8NCE2 650 aa21.75■■□□□ 1.07
VPS9D1-203ENST00000563798 KIF23Q02241 960 aaPredicted RBP21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 TAF7LQ5H9L4 462 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 REM2Q8IYK8 340 aaPredicted RBP21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 CERS5Q8N5B7 392 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 CNNM1Q9NRU3 951 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 SAGE1Q9NXZ1 904 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 TSKSQ9UJT2 592 aa21.74■■□□□ 1.07
VPS9D1-203ENST00000563798 UBE4AQ14139 1066 aa21.73■■□□□ 1.07
VPS9D1-203ENST00000563798 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
VPS9D1-203ENST00000563798 SASH1O94885 1247 aa21.72■■□□□ 1.07
VPS9D1-203ENST00000563798 APOBEC3FQ8IUX4 373 aaKnown RBP21.72■■□□□ 1.07
VPS9D1-203ENST00000563798 RIPOR2Q9Y4F9 1068 aa21.72■■□□□ 1.07
VPS9D1-203ENST00000563798 RASAL3Q86YV0 1011 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms