RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 SH2B1Q9NRF2 756 aaPredicted RBP5.64□□□□□ -1.51
LINC01416-201ENST00000563553 FNDC3AQ9Y2H6 1198 aaKnown RBP5.64□□□□□ -1.51
LINC01416-201ENST00000563553 GTF3C3Q9Y5Q9 886 aa5.64□□□□□ -1.51
LINC01416-201ENST00000563553 NPR3P17342 541 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 TTC39BQ5VTQ0 682 aaPredicted RBP5.63□□□□□ -1.51
LINC01416-201ENST00000563553 MAP4K3Q8IVH8 894 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
LINC01416-201ENST00000563553 ZFP64Q9NPA5 681 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 TRPA1O75762 1119 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 LRP8Q14114 963 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 ADAM19Q9H013 955 aa5.63□□□□□ -1.51
LINC01416-201ENST00000563553 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
LINC01416-201ENST00000563553 HYAL3O43820 417 aaPredicted RBP5.62□□□□□ -1.51
LINC01416-201ENST00000563553 DNM1Q05193 864 aaKnown RBP5.62□□□□□ -1.51
LINC01416-201ENST00000563553 KIAA1211Q6ZU35 1233 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 ZNF438Q7Z4V0 828 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 CACTIN-AS1Q8N1I8 211 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 DZANK1Q9NVP4 752 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 CDC27P30260 824 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 CDC25BP30305 580 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 MUC3BQ9H195 1237 aa5.62□□□□□ -1.51
LINC01416-201ENST00000563553 FSCN2O14926 492 aa5.61□□□□□ -1.51
LINC01416-201ENST00000563553 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC01416-201ENST00000563553 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
LINC01416-201ENST00000563553 HGSNATQ68CP4 663 aa5.61□□□□□ -1.51
LINC01416-201ENST00000563553 MZF1P28698 734 aaPredicted RBP5.6□□□□□ -1.51
LINC01416-201ENST00000563553 NOM1Q5C9Z4 860 aaKnown RBP5.6□□□□□ -1.51
LINC01416-201ENST00000563553 NCAPG2Q86XI2 1143 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 UBASH3BQ8TF42 649 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 FZD6O60353 706 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 KLHDC7BQ96G42 594 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 SPACA7Q96KW9 195 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 RNF112Q9ULX5 631 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 POLIQ9UNA4 740 aa5.6□□□□□ -1.51
LINC01416-201ENST00000563553 FSTP19883 344 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 ECM1Q16610 540 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 SOX13Q9UN79 622 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 EREGO14944 169 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 GLB1P16278 677 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 ACAD11Q709F0 780 aa5.59□□□□□ -1.51
LINC01416-201ENST00000563553 FAM46AQ96IP4 442 aaKnown RBP5.59□□□□□ -1.51
LINC01416-201ENST00000563553 DISP3Q9P2K9 1392 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 TNFRSF21O75509 655 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 PPP1R15AO75807 674 aaPredicted RBP5.58□□□□□ -1.52
LINC01416-201ENST00000563553 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
LINC01416-201ENST00000563553 ZKSCAN3Q9BRR0 538 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 FOXD3Q9UJU5 478 aaPredicted RBP5.58□□□□□ -1.52
LINC01416-201ENST00000563553 H3BRJ5 948 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 PTPRAP18433 802 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 CES1P23141 567 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 C8orf34Q49A92 452 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 VN1R5Q7Z5H4 357 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 KLHL23Q8NBE8 558 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 LATS2Q9NRM7 1088 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 DCAF1Q9Y4B6 1507 aa5.58□□□□□ -1.52
LINC01416-201ENST00000563553 MED26O95402 600 aa5.57□□□□□ -1.52
LINC01416-201ENST00000563553 GJD3Q8N144 294 aa5.57□□□□□ -1.52
LINC01416-201ENST00000563553 CCDC87Q9NVE4 849 aa5.57□□□□□ -1.52
LINC01416-201ENST00000563553 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
LINC01416-201ENST00000563553 TMEM102Q8N9M5 508 aaPredicted RBP5.57□□□□□ -1.52
LINC01416-201ENST00000563553 NXPE3Q969Y0 559 aa5.57□□□□□ -1.52
LINC01416-201ENST00000563553 CD97P48960 835 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 ZNF211Q13398 564 aaPredicted RBP5.56□□□□□ -1.52
LINC01416-201ENST00000563553 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 ANO2Q9NQ90 1003 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 SEC31BQ9NQW1 1179 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 RPLP1P05386 114 aaKnown RBP5.56□□□□□ -1.52
LINC01416-201ENST00000563553 PIP4K2BP78356 416 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 RAXQ9Y2V3 346 aa5.56□□□□□ -1.52
LINC01416-201ENST00000563553 DLGAP3O95886 979 aa5.55□□□□□ -1.52
LINC01416-201ENST00000563553 PREPP48147 710 aa5.55□□□□□ -1.52
LINC01416-201ENST00000563553 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
LINC01416-201ENST00000563553 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
LINC01416-201ENST00000563553 OSMRQ99650 979 aa5.55□□□□□ -1.52
LINC01416-201ENST00000563553 SOX1O00570 391 aaPredicted RBP5.54□□□□□ -1.52
LINC01416-201ENST00000563553 NLRP12P59046 1061 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 ZDHHC13Q8IUH4 622 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 WNT8BQ93098 351 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 BHLHE41Q9C0J9 482 aaPredicted RBP5.54□□□□□ -1.52
LINC01416-201ENST00000563553 NRSN2Q9GZP1 204 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 C7orf69Q9H7B7 122 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 UVSSAQ2YD98 709 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
LINC01416-201ENST00000563553 CCDC180Q9P1Z9 1646 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 HMX2A2RU54 273 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 METTL12A8MUP2 240 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 TGFB1P01137 390 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 IGLV1-40P01703 118 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 FKBP4Q02790 459 aaKnown RBP eCLIP5.53□□□□□ -1.52
LINC01416-201ENST00000563553 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.53□□□□□ -1.52
LINC01416-201ENST00000563553 TRIM42Q8IWZ5 723 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 ADAMTS4O75173 837 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 FAM13AO94988 1023 aa5.53□□□□□ -1.52
LINC01416-201ENST00000563553 SF3B2Q13435 895 aaKnown RBP5.53□□□□□ -1.52
LINC01416-201ENST00000563553 ALKBH2Q6NS38 261 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms