RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 CPSF1Q10570 1443 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 COL18A1P39060 1754 aa11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 ACEP12821 1306 aa11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 MTFR1Q15390 333 aa11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 AIDAQ96BJ3 306 aa11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 CUEDC1Q9NWM3 386 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
NSMCE1-205ENST00000563512 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 RFX1P22670 979 aa11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 SIX5Q8N196 739 aa11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 TESK2Q96S53 571 aa11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 SLIT2O94813 1529 aa11.18□□□□□ -0.62
NSMCE1-205ENST00000563512 KAT6BQ8WYB5 2073 aa11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 ZNF772Q68DY9 489 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 NUCKS1Q9H1E3 243 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 SCHIP1Q9P0W5 487 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-205ENST00000563512 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 SEC13P55735 322 aa11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 DBN1Q16643 649 aa11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 EDC4Q6P2E9 1401 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-205ENST00000563512 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 M0R2N6 131 aa11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 MSX1P28360 303 aa11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
NSMCE1-205ENST00000563512 NFAT5O94916 1531 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 USP19O94966 1318 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 AFF2P51816 1311 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 TMF1P82094 1093 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 CRTC2Q53ET0 693 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 EFHC2Q5JST6 749 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 C1orf216Q8TAB5 229 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 CNTNAP3Q9BZ76 1288 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 GLI3P10071 1580 aa11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-205ENST00000563512 ATRNO75882 1429 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L10C9JJH3 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L21D6R901 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 TATP17735 454 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 PTK7Q13308 1070 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 TSEN2Q8NCE0 465 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 ZNF232Q9UNY5 417 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 CPDO75976 1380 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
NSMCE1-205ENST00000563512 BCL9LQ86UU0 1499 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 DPYDQ12882 1025 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 C8orf37Q96NL8 207 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
NSMCE1-205ENST00000563512 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 GPR25O00155 361 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 ADAMTS2O95450 1211 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 EPHA4P54764 986 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 FOXK2Q01167 660 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 LBRQ14739 615 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 SBF2Q86WG5 1849 aa11.11□□□□□ -0.63
NSMCE1-205ENST00000563512 OVOS2A0A0J9YW53 1432 aa11.1□□□□□ -0.63
NSMCE1-205ENST00000563512 OVOS2Q6IE36 1432 aa11.1□□□□□ -0.63
NSMCE1-205ENST00000563512 TEAD4Q15561 434 aa11.1□□□□□ -0.63
NSMCE1-205ENST00000563512 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms