RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 FAM9BQ8IZU0 186 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 CDCA5Q96FF9 252 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 HHIPL1Q96JK4 782 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 BEGAINQ9BUH8 593 aa8.84□□□□□ -0.99
CDH11-208ENST00000563492 GBA2Q9HCG7 927 aaPredicted RBP8.84□□□□□ -0.99
CDH11-208ENST00000563492 SCN9AQ15858 1988 aa8.83□□□□□ -1
CDH11-208ENST00000563492 TAF5LO75529 589 aa8.83□□□□□ -1
CDH11-208ENST00000563492 KIF23Q02241 960 aaPredicted RBP8.83□□□□□ -1
CDH11-208ENST00000563492 RGMBQ6NW40 437 aa8.83□□□□□ -1
CDH11-208ENST00000563492 PODNQ7Z5L7 613 aa8.83□□□□□ -1
CDH11-208ENST00000563492 WDR63Q8IWG1 891 aa8.83□□□□□ -1
CDH11-208ENST00000563492 SULF1Q8IWU6 871 aa8.83□□□□□ -1
CDH11-208ENST00000563492 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
CDH11-208ENST00000563492 AGBL3Q8NEM8 1001 aa8.83□□□□□ -1
CDH11-208ENST00000563492 LINS1Q8NG48 757 aa8.83□□□□□ -1
CDH11-208ENST00000563492 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
CDH11-208ENST00000563492 PLA2G12BQ9BX93 195 aa8.83□□□□□ -1
CDH11-208ENST00000563492 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
CDH11-208ENST00000563492 MYOZ2Q9NPC6 264 aa8.83□□□□□ -1
CDH11-208ENST00000563492 ZNF804BA4D1E1 1349 aa8.82□□□□□ -1
CDH11-208ENST00000563492 SASH1O94885 1247 aa8.82□□□□□ -1
CDH11-208ENST00000563492 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
CDH11-208ENST00000563492 ZNF157P51786 506 aaPredicted RBP8.82□□□□□ -1
CDH11-208ENST00000563492 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
CDH11-208ENST00000563492 CHRNDQ07001 517 aa8.82□□□□□ -1
CDH11-208ENST00000563492 BEND3Q5T5X7 828 aa8.82□□□□□ -1
CDH11-208ENST00000563492 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
CDH11-208ENST00000563492 MED23Q9ULK4 1368 aa8.82□□□□□ -1
CDH11-208ENST00000563492 UBE2Q2LH0YL09 131 aa8.81□□□□□ -1
CDH11-208ENST00000563492 GTF2IP78347 998 aa8.81□□□□□ -1
CDH11-208ENST00000563492 NOGQ13253 232 aa8.81□□□□□ -1
CDH11-208ENST00000563492 NCBP3Q53F19 620 aaKnown RBP8.81□□□□□ -1
CDH11-208ENST00000563492 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
CDH11-208ENST00000563492 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
CDH11-208ENST00000563492 CERS5Q8N5B7 392 aa8.81□□□□□ -1
CDH11-208ENST00000563492 CSRNP1Q96S65 589 aa8.81□□□□□ -1
CDH11-208ENST00000563492 MPHOSPH8Q99549 860 aa8.81□□□□□ -1
CDH11-208ENST00000563492 COA1Q9GZY4 146 aa8.81□□□□□ -1
CDH11-208ENST00000563492 FZD1Q9UP38 647 aa8.81□□□□□ -1
CDH11-208ENST00000563492 JAG2Q9Y219 1238 aa8.81□□□□□ -1
CDH11-208ENST00000563492 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
CDH11-208ENST00000563492 AOX1Q06278 1338 aa8.8□□□□□ -1
CDH11-208ENST00000563492 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
CDH11-208ENST00000563492 ANKRD18BA2A2Z9 1011 aa8.8□□□□□ -1
CDH11-208ENST00000563492 CCDC85CA6NKD9 419 aa8.8□□□□□ -1
CDH11-208ENST00000563492 WNT10BO00744 389 aa8.8□□□□□ -1
CDH11-208ENST00000563492 PLIN1O60240 522 aa8.8□□□□□ -1
CDH11-208ENST00000563492 TRPA1O75762 1119 aa8.8□□□□□ -1
CDH11-208ENST00000563492 SLC10A3P09131 477 aa8.8□□□□□ -1
CDH11-208ENST00000563492 PRKG1Q13976 671 aa8.8□□□□□ -1
CDH11-208ENST00000563492 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
CDH11-208ENST00000563492 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
CDH11-208ENST00000563492 KAZALD1Q96I82 304 aa8.8□□□□□ -1
CDH11-208ENST00000563492 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
CDH11-208ENST00000563492 ANKRD2Q9GZV1 360 aa8.8□□□□□ -1
CDH11-208ENST00000563492 MYH16Q9H6N6 1097 aa8.8□□□□□ -1
CDH11-208ENST00000563492 RNF186Q9NXI6 227 aa8.8□□□□□ -1
CDH11-208ENST00000563492 CHMP3Q9Y3E7 222 aa8.8□□□□□ -1
CDH11-208ENST00000563492 THSD7BQ9C0I4 1608 aa8.8□□□□□ -1
CDH11-208ENST00000563492 TRPM7Q96QT4 1865 aa8.79□□□□□ -1
CDH11-208ENST00000563492 ZEB1P37275 1124 aaPredicted RBP8.79□□□□□ -1
CDH11-208ENST00000563492 KCNJ4P48050 445 aa8.79□□□□□ -1
CDH11-208ENST00000563492 MKRN3Q13064 507 aaKnown RBP8.79□□□□□ -1
CDH11-208ENST00000563492 IFIT5Q13325 482 aaKnown RBP8.79□□□□□ -1
CDH11-208ENST00000563492 SLC4A10Q6U841 1118 aa8.79□□□□□ -1
CDH11-208ENST00000563492 RASAL3Q86YV0 1011 aa8.79□□□□□ -1
CDH11-208ENST00000563492 CCDC102AQ96A19 550 aa8.79□□□□□ -1
CDH11-208ENST00000563492 PUS3Q9BZE2 481 aaKnown RBP8.79□□□□□ -1
CDH11-208ENST00000563492 CD209Q9NNX6 404 aa8.79□□□□□ -1
CDH11-208ENST00000563492 ZNF609O15014 1411 aa8.79□□□□□ -1
CDH11-208ENST00000563492 F8W031 263 aaPredicted RBP8.78□□□□□ -1
CDH11-208ENST00000563492 GRM8O00222 908 aa8.78□□□□□ -1
CDH11-208ENST00000563492 CA12O43570 354 aa8.78□□□□□ -1
CDH11-208ENST00000563492 NBPF7P0C2Y1 421 aaPredicted RBP8.78□□□□□ -1
CDH11-208ENST00000563492 DGKZQ13574 1117 aa8.78□□□□□ -1
CDH11-208ENST00000563492 OGFOD1Q8N543 542 aa8.78□□□□□ -1
CDH11-208ENST00000563492 SUCLG2Q96I99 432 aa8.78□□□□□ -1
CDH11-208ENST00000563492 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
CDH11-208ENST00000563492 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
CDH11-208ENST00000563492 ZNF521Q96K83 1311 aa8.78□□□□□ -1
CDH11-208ENST00000563492 POLR2AP24928 1970 aaKnown RBP8.77□□□□□ -1
CDH11-208ENST00000563492 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
CDH11-208ENST00000563492 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
CDH11-208ENST00000563492 LDHAL6AQ6ZMR3 332 aa8.77□□□□□ -1.01
CDH11-208ENST00000563492 C9orf78Q9NZ63 289 aaPredicted RBP8.77□□□□□ -1.01
CDH11-208ENST00000563492 PITPNM2Q9BZ72 1349 aa8.77□□□□□ -1.01
CDH11-208ENST00000563492 CLRN2A0PK11 232 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 TBC1D8O95759 1140 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 GYG1P46976 350 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 GRIK5Q16478 980 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 C15orf52Q6ZUT6 534 aaKnown RBP8.76□□□□□ -1.01
CDH11-208ENST00000563492 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
CDH11-208ENST00000563492 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 PRMT6Q96LA8 375 aaPredicted RBP8.76□□□□□ -1.01
CDH11-208ENST00000563492 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
CDH11-208ENST00000563492 CNNM1Q9NRU3 951 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms