RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 GPTP24298 496 aa11.85□□□□□ -0.51
UBFD1-202ENST00000563366 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 IFIT5Q13325 482 aaKnown RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
UBFD1-202ENST00000563366 C16orf71Q8IYS4 520 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 UTP14AQ9BVJ6 771 aaKnown RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
UBFD1-202ENST00000563366 TNS1Q9HBL0 1735 aaKnown RBP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 IRS4O14654 1257 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 ZPR1O75312 459 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 CSF1RP07333 972 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 CTSWP56202 376 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 FAM89AQ96GI7 184 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 NIP7Q9Y221 180 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBFD1-202ENST00000563366 LRP5O75197 1615 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 UBN2Q6ZU65 1347 aa11.84□□□□□ -0.51
UBFD1-202ENST00000563366 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 SASH1O94885 1247 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 SDSP20132 328 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 AACSQ86V21 672 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-202ENST00000563366 NYXQ9GZU5 481 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 SIL1Q9H173 461 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
UBFD1-202ENST00000563366 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 EYA2O00167 538 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 PLSCR1O15162 318 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 REC8O95072 547 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 PTPREP23469 700 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
UBFD1-202ENST00000563366 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-202ENST00000563366 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 TRIM37O94972 964 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 SSFA2P28290 1259 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 RFC4P35249 363 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 PRSS12P56730 875 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 TBC1D32Q96NH3 1257 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
UBFD1-202ENST00000563366 ZNF609O15014 1411 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 HIP1O00291 1037 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 NTSR2O95665 410 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 OATP04181 439 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
UBFD1-202ENST00000563366 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 TICAM2Q86XR7 235 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
UBFD1-202ENST00000563366 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
UBFD1-202ENST00000563366 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 RIC1Q4ADV7 1423 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 EPB41L2O43491 1005 aaKnown RBP11.79□□□□□ -0.52
UBFD1-202ENST00000563366 ITGA6P23229 1130 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-202ENST00000563366 TFCP2Q12800 502 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 ATG9AQ7Z3C6 839 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 RILPL2Q969X0 211 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-202ENST00000563366 C22orf23Q9BZE7 217 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
UBFD1-202ENST00000563366 COL9A1P20849 921 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 RBM25P49756 843 aaKnown RBP11.78□□□□□ -0.52
UBFD1-202ENST00000563366 KCNQ4P56696 695 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 LDHAL6AQ6ZMR3 332 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 EVI5LQ96CN4 794 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
UBFD1-202ENST00000563366 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.52
UBFD1-202ENST00000563366 ATP5JP18859 108 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 CLCN1P35523 988 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 BECN1Q14457 450 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms