RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NEMFO60524 1076 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 IQCB1Q15051 598 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 CCDC73Q6ZRK6 1079 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
USB1-207ENST00000563149 RGS22Q8NE09 1264 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 CCDC94Q9BW85 323 aaPredicted RBP15.35■□□□□ 0.05
USB1-207ENST00000563149 DNAJC25Q9H1X3 360 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 CTNNA3Q9UI47 895 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 TJP1Q07157 1748 aa15.35■□□□□ 0.05
USB1-207ENST00000563149 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 NBPF14Q5TI25 921 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
USB1-207ENST00000563149 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 MRFAP1L1Q96HT8 127 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 CHGBP05060 677 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
USB1-207ENST00000563149 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
USB1-207ENST00000563149 TIMM10P62072 90 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 LRRC2Q9BYS8 371 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 ANO10Q9NW15 660 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
USB1-207ENST00000563149 ABCC12Q96J65 1359 aa15.33■□□□□ 0.05
USB1-207ENST00000563149 MAST3O60307 1309 aa15.33■□□□□ 0.04
USB1-207ENST00000563149 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
USB1-207ENST00000563149 SYCP1Q15431 976 aa15.33■□□□□ 0.04
USB1-207ENST00000563149 ENGASEQ8NFI3 743 aa15.33■□□□□ 0.04
USB1-207ENST00000563149 AKAP2Q9Y2D5 859 aa15.33■□□□□ 0.04
USB1-207ENST00000563149 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 CTIFO43310 598 aaKnown RBP15.32■□□□□ 0.04
USB1-207ENST00000563149 KINO60870 393 aaKnown RBP15.32■□□□□ 0.04
USB1-207ENST00000563149 SNW1Q13573 536 aaKnown RBP15.32■□□□□ 0.04
USB1-207ENST00000563149 ZNF710Q8N1W2 664 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 USP28Q96RU2 1077 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
USB1-207ENST00000563149 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 BCL2L12Q9HB09 334 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 RTEL1Q9NZ71 1219 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 A0A1W2PQ27 194 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 A0A1W2PQ64 194 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 NKX1-1Q15270 411 aaPredicted RBP15.31■□□□□ 0.04
USB1-207ENST00000563149 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
USB1-207ENST00000563149 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 KCPQ6ZWJ8 1503 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 SMTNL1A8MU46 457 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 BECN2A8MW95 431 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 CHRNA2Q15822 529 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 IMMTQ16891 758 aaKnown RBP15.3■□□□□ 0.04
USB1-207ENST00000563149 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
USB1-207ENST00000563149 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 NAT10Q9H0A0 1025 aaKnown RBP15.3■□□□□ 0.04
USB1-207ENST00000563149 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
USB1-207ENST00000563149 RBM6P78332 1123 aaKnown RBP15.29■□□□□ 0.04
USB1-207ENST00000563149 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
USB1-207ENST00000563149 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
USB1-207ENST00000563149 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 FSIP1Q8NA03 581 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 ANKRD7Q92527 254 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
USB1-207ENST00000563149 M0R2C6 588 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 YEATS4O95619 227 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 ME1P48163 572 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 TTC39AQ5SRH9 613 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
USB1-207ENST00000563149 BRAPQ7Z569 592 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 CEP57L1Q8IYX8 460 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
USB1-207ENST00000563149 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
USB1-207ENST00000563149 LRMPQ12912 555 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
USB1-207ENST00000563149 LRRC8AQ8IWT6 810 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 FMR1NBQ8N0W7 255 aaPredicted RBP15.28■□□□□ 0.04
USB1-207ENST00000563149 KCNG4Q8TDN1 519 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 CABLES1Q8TDN4 633 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 CACTINQ8WUQ7 758 aaKnown RBP15.28■□□□□ 0.04
USB1-207ENST00000563149 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
USB1-207ENST00000563149 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
USB1-207ENST00000563149 A1BGP04217 495 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 TNNT1P13805 278 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms