RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ZC3H4Q9UPT8 1303 aaKnown RBP7.8□□□□□ -1.16
CNOT1-204ENST00000563130 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
CNOT1-204ENST00000563130 FRAT1Q92837 279 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-204ENST00000563130 SUCLG2Q96I99 432 aa7.8□□□□□ -1.16
CNOT1-204ENST00000563130 RTFDC1Q9BY42 306 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-204ENST00000563130 ITGA6P23229 1130 aa7.8□□□□□ -1.16
CNOT1-204ENST00000563130 CDC5LQ99459 802 aaKnown RBP7.8□□□□□ -1.16
CNOT1-204ENST00000563130 RNF181Q9P0P0 153 aa7.8□□□□□ -1.16
CNOT1-204ENST00000563130 DUOX1Q9NRD9 1551 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 LTBP1Q14766 1721 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 LMBR1LQ6UX01 489 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 ANKRD18AQ8IVF6 992 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 ANKRD44Q8N8A2 993 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 ZNF784Q8NCA9 323 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-204ENST00000563130 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-204ENST00000563130 PODXL2Q9NZ53 605 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 RCAN3Q9UKA8 241 aa7.79□□□□□ -1.16
CNOT1-204ENST00000563130 MPNDQ8N594 471 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 LARP6Q9BRS8 491 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 VPS33BQ9H267 617 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 BICC1Q9H694 974 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 ZNF277Q9NRM2 450 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 RLBP1P12271 317 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 IARSP41252 1262 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 FOXK1P85037 733 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 IFIT5Q13325 482 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 DPP8Q6V1X1 898 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 CLUAP1Q96AJ1 413 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 YTHDC1Q96MU7 727 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 MEIS3Q99687 375 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 TMX4Q9H1E5 349 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 COL4A5P29400 1685 aa7.78□□□□□ -1.16
CNOT1-204ENST00000563130 DICER1Q9UPY3 1922 aaKnown RBP7.78□□□□□ -1.16
CNOT1-204ENST00000563130 ANKRD18BA2A2Z9 1011 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 GPSM2P81274 684 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 DZIP1LQ8IYY4 767 aaKnown RBP7.77□□□□□ -1.17
CNOT1-204ENST00000563130 POLLQ9UGP5 575 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 MINPP1Q9UNW1 487 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
CNOT1-204ENST00000563130 CCDC88AQ3V6T2 1871 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 FZD9O00144 591 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 UBTFL1P0CB47 393 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-204ENST00000563130 IGHMBP2P38935 993 aaKnown RBP7.77□□□□□ -1.17
CNOT1-204ENST00000563130 KIAA2012Q0VF49 1180 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 SUPT20HQ8NEM7 779 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 TBC1D16Q8TBP0 767 aa7.77□□□□□ -1.17
CNOT1-204ENST00000563130 GNAI3P08754 354 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 DSG2Q14126 1118 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 MFSD10Q14728 455 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 DOK7Q18PE1 504 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 CCDC57Q2TAC2 916 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 XDHP47989 1333 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 TIAM2Q8IVF5 1701 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 GLTPD2A6NH11 291 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 ZBTB7BO15156 539 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-204ENST00000563130 RFX5P48382 616 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-204ENST00000563130 MTX1Q13505 466 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 PPP1R15BQ5SWA1 713 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 DDX27Q96GQ7 796 aaKnown RBP7.76□□□□□ -1.17
CNOT1-204ENST00000563130 ZNF594Q96JF6 807 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-204ENST00000563130 MPHOSPH8Q99549 860 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 HDAC5Q9UQL6 1122 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 CHMP3Q9Y3E7 222 aa7.76□□□□□ -1.17
CNOT1-204ENST00000563130 LRRFIP2Q9Y608 721 aaKnown RBP7.76□□□□□ -1.17
CNOT1-204ENST00000563130 WTIPA6NIX2 430 aaPredicted RBP7.75□□□□□ -1.17
CNOT1-204ENST00000563130 PPIP5K2O43314 1243 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 CHRNDQ07001 517 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 AOC3Q16853 763 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 PLPP6Q8IY26 295 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
CNOT1-204ENST00000563130 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 JDP2Q8WYK2 163 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 ANKIB1Q9P2G1 1089 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 MS4A1P11836 297 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 ATP2B4P23634 1241 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 WASHC4Q2M389 1173 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 LDHAL6AQ6ZMR3 332 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 PANK1Q8TE04 598 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 ANKRD2Q9GZV1 360 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 RIPOR2Q9Y4F9 1068 aa7.75□□□□□ -1.17
CNOT1-204ENST00000563130 C6orf229H3BNL8 230 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 PLIN1O60240 522 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 UFL1O94874 794 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
CNOT1-204ENST00000563130 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 EYA3Q99504 573 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 PUS3Q9BZE2 481 aaKnown RBP7.74□□□□□ -1.17
CNOT1-204ENST00000563130 GPBP1L1Q9HC44 474 aaPredicted RBP7.74□□□□□ -1.17
CNOT1-204ENST00000563130 WDR70Q9NW82 654 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 ZNRF3Q9ULT6 936 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 LEMD3Q9Y2U8 911 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 IRS2Q9Y4H2 1338 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 SPEF2Q9C093 1822 aa7.74□□□□□ -1.17
CNOT1-204ENST00000563130 YDJCA8MPS7 323 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 POTECB2RU33 542 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 RIMBP2O15034 1052 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 GNAI2P04899 355 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms