RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 UBE4AQ14139 1066 aa23.37■■□□□ 1.33
CDH11-206ENST00000562998 LDHDQ86WU2 507 aa23.37■■□□□ 1.33
CDH11-206ENST00000562998 ZBTB12Q9Y330 459 aaPredicted RBP23.37■■□□□ 1.33
CDH11-206ENST00000562998 G3V3G9 751 aa23.36■■□□□ 1.33
CDH11-206ENST00000562998 HSPA6P17066 643 aa23.36■■□□□ 1.33
CDH11-206ENST00000562998 RPS12P25398 132 aaKnown RBP23.36■■□□□ 1.33
CDH11-206ENST00000562998 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
CDH11-206ENST00000562998 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
CDH11-206ENST00000562998 FBXO3Q9UK99 471 aa23.36■■□□□ 1.33
CDH11-206ENST00000562998 EYA2O00167 538 aa23.35■■□□□ 1.33
CDH11-206ENST00000562998 ZBTB7BO15156 539 aaPredicted RBP23.35■■□□□ 1.33
CDH11-206ENST00000562998 KCNJ4P48050 445 aa23.35■■□□□ 1.33
CDH11-206ENST00000562998 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
CDH11-206ENST00000562998 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
CDH11-206ENST00000562998 FTSJ3Q8IY81 847 aaKnown RBP23.35■■□□□ 1.33
CDH11-206ENST00000562998 GMLQ99445 158 aa23.35■■□□□ 1.33
CDH11-206ENST00000562998 ADARB2Q9NS39 739 aaKnown RBP23.35■■□□□ 1.33
CDH11-206ENST00000562998 PLIN1O60240 522 aa23.34■■□□□ 1.33
CDH11-206ENST00000562998 PDE8BO95263 885 aa23.34■■□□□ 1.33
CDH11-206ENST00000562998 GNAI2P04899 355 aa23.34■■□□□ 1.33
CDH11-206ENST00000562998 COPRSQ9NQ92 184 aa23.34■■□□□ 1.33
CDH11-206ENST00000562998 CNOT7Q9UIV1 285 aaKnown RBP23.34■■□□□ 1.33
CDH11-206ENST00000562998 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 USP17L3A6NCW0 530 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 USP17L4A6NCW7 530 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 CIAO1O76071 339 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
CDH11-206ENST00000562998 USP17L1Q7RTZ2 530 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 CD209Q9NNX6 404 aa23.33■■□□□ 1.33
CDH11-206ENST00000562998 IL1R1P14778 569 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 EAPPQ56P03 285 aaPredicted RBP23.32■■□□□ 1.32
CDH11-206ENST00000562998 METTL24Q5JXM2 366 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 DACT2Q5SW24 774 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 STRIP1Q5VSL9 837 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 MICALL2Q8IY33 904 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 PANK1Q8TE04 598 aa23.32■■□□□ 1.32
CDH11-206ENST00000562998 FGFR2P21802 821 aa23.31■■□□□ 1.32
CDH11-206ENST00000562998 HIRAP54198 1017 aaPredicted RBP23.31■■□□□ 1.32
CDH11-206ENST00000562998 ITPRIPQ8IWB1 547 aa23.31■■□□□ 1.32
CDH11-206ENST00000562998 PGAP2Q9UHJ9 254 aa23.31■■□□□ 1.32
CDH11-206ENST00000562998 CEP350Q5VT06 3117 aa23.31■■□□□ 1.32
CDH11-206ENST00000562998 ITGBL1O95965 494 aaPredicted RBP23.3■■□□□ 1.32
CDH11-206ENST00000562998 FAM84BQ96KN1 310 aaPredicted RBP23.3■■□□□ 1.32
CDH11-206ENST00000562998 PA2G4Q9UQ80 394 aaKnown RBP23.3■■□□□ 1.32
CDH11-206ENST00000562998 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
CDH11-206ENST00000562998 MS4A1P11836 297 aa23.29■■□□□ 1.32
CDH11-206ENST00000562998 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
CDH11-206ENST00000562998 ZNF804AQ7Z570 1209 aa23.29■■□□□ 1.32
CDH11-206ENST00000562998 TRPM4Q8TD43 1214 aa23.29■■□□□ 1.32
CDH11-206ENST00000562998 PASKQ96RG2 1323 aa23.29■■□□□ 1.32
CDH11-206ENST00000562998 PNMA6EA0A0J9YXQ4 647 aa23.28■■□□□ 1.32
CDH11-206ENST00000562998 H7C1D1 291 aa23.28■■□□□ 1.32
CDH11-206ENST00000562998 FBXO33Q7Z6M2 555 aa23.28■■□□□ 1.32
CDH11-206ENST00000562998 TDRD7Q8NHU6 1098 aaKnown RBP23.28■■□□□ 1.32
CDH11-206ENST00000562998 EGFRP00533 1210 aa23.27■■□□□ 1.32
CDH11-206ENST00000562998 IL15P40933 162 aaPredicted RBP23.27■■□□□ 1.32
CDH11-206ENST00000562998 TTLL5Q6EMB2 1281 aa23.27■■□□□ 1.32
CDH11-206ENST00000562998 ZC3H15Q8WU90 426 aaKnown RBP23.27■■□□□ 1.32
CDH11-206ENST00000562998 SIL1Q9H173 461 aa23.27■■□□□ 1.32
CDH11-206ENST00000562998 GYG1P46976 350 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 APLP1P51693 650 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 GTF2IP78347 998 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 POLA2Q14181 598 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
CDH11-206ENST00000562998 MAP1SQ66K74 1059 aaPredicted RBP23.26■■□□□ 1.31
CDH11-206ENST00000562998 SAMD7Q7Z3H4 446 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 MXD3Q9BW11 206 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 CLEC11AQ9Y240 323 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 MYO3BQ8WXR4 1341 aa23.26■■□□□ 1.31
CDH11-206ENST00000562998 SASH1O94885 1247 aa23.25■■□□□ 1.31
CDH11-206ENST00000562998 HIBADHP31937 336 aaKnown RBP23.25■■□□□ 1.31
CDH11-206ENST00000562998 ATP8B2P98198 1209 aa23.25■■□□□ 1.31
CDH11-206ENST00000562998 MVPQ14764 893 aaKnown RBP23.25■■□□□ 1.31
CDH11-206ENST00000562998 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
CDH11-206ENST00000562998 USP17L8P0C7I0 530 aa23.24■■□□□ 1.31
CDH11-206ENST00000562998 FKBP1AP62942 108 aaKnown RBP23.24■■□□□ 1.31
CDH11-206ENST00000562998 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
CDH11-206ENST00000562998 LPIN2Q92539 896 aa23.24■■□□□ 1.31
CDH11-206ENST00000562998 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
CDH11-206ENST00000562998 FAM205AQ6ZU69 1335 aa23.24■■□□□ 1.31
CDH11-206ENST00000562998 TBC1D10BQ4KMP7 808 aaPredicted RBP23.23■■□□□ 1.31
CDH11-206ENST00000562998 CERS5Q8N5B7 392 aa23.23■■□□□ 1.31
CDH11-206ENST00000562998 C1orf115Q9H7X2 142 aa23.23■■□□□ 1.31
CDH11-206ENST00000562998 CEP126Q9P2H0 1117 aa23.23■■□□□ 1.31
CDH11-206ENST00000562998 MMP14P50281 582 aa23.22■■□□□ 1.31
CDH11-206ENST00000562998 C20orf194Q5TEA3 1177 aa23.22■■□□□ 1.31
CDH11-206ENST00000562998 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
CDH11-206ENST00000562998 KIF4BQ2VIQ3 1234 aa23.21■■□□□ 1.31
CDH11-206ENST00000562998 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
CDH11-206ENST00000562998 DDX19BQ9UMR2 479 aa23.21■■□□□ 1.31
CDH11-206ENST00000562998 COG6Q9Y2V7 657 aa23.21■■□□□ 1.31
CDH11-206ENST00000562998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.21■■□□□ 1.31
CDH11-206ENST00000562998 ARAP2Q8WZ64 1704 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 ZBTB22O15209 634 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 SLC5A1P13866 664 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 BCAMP50895 628 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 CAVIN4Q5BKX8 364 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 CEP85Q6P2H3 762 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms