RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 USP17L4A6NCW7 530 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 BCAR3O75815 825 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 UBE4AQ14139 1066 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 USP17L1Q7RTZ2 530 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 GPR101Q96P66 508 aaPredicted RBP11.12□□□□□ -0.63
CYLD-204ENST00000562884 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
CYLD-204ENST00000562884 MYO3BQ8WXR4 1341 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 MS4A1P11836 297 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 TRIM27P14373 513 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
CYLD-204ENST00000562884 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 CNTROBQ8N137 903 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
CYLD-204ENST00000562884 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
CYLD-204ENST00000562884 PLIN1O60240 522 aa11.1□□□□□ -0.63
CYLD-204ENST00000562884 TAF5LO75529 589 aa11.1□□□□□ -0.63
CYLD-204ENST00000562884 FTSJ3Q8IY81 847 aaKnown RBP11.1□□□□□ -0.63
CYLD-204ENST00000562884 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
CYLD-204ENST00000562884 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
CYLD-204ENST00000562884 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
CYLD-204ENST00000562884 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
CYLD-204ENST00000562884 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
CYLD-204ENST00000562884 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
CYLD-204ENST00000562884 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
CYLD-204ENST00000562884 TTLL5Q6EMB2 1281 aa11.09□□□□□ -0.63
CYLD-204ENST00000562884 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
CYLD-204ENST00000562884 CD209Q9NNX6 404 aa11.09□□□□□ -0.63
CYLD-204ENST00000562884 ZBTB12Q9Y330 459 aaPredicted RBP11.09□□□□□ -0.63
CYLD-204ENST00000562884 TMEM88BA6NKF7 163 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 EYA2O00167 538 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 CIAO1O76071 339 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 PDE8BO95263 885 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 GNAI2P04899 355 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 USP17L8P0C7I0 530 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 IL1R1P14778 569 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 FKBP1AP62942 108 aaKnown RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 MAP1SQ66K74 1059 aaPredicted RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 GMLQ99445 158 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 PUS3Q9BZE2 481 aaKnown RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
CYLD-204ENST00000562884 LRRFIP2Q9Y608 721 aaKnown RBP11.08□□□□□ -0.64
CYLD-204ENST00000562884 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
CYLD-204ENST00000562884 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
CYLD-204ENST00000562884 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
CYLD-204ENST00000562884 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
CYLD-204ENST00000562884 DACT2Q5SW24 774 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
CYLD-204ENST00000562884 MEIS3Q99687 375 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
CYLD-204ENST00000562884 SASH1O94885 1247 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 IL15P40933 162 aaPredicted RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 GTF2IP78347 998 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 MTX1Q13505 466 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 TMEM57Q8N5G2 664 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 KLRG1Q96E93 195 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 CHMP4BQ9H444 224 aaKnown RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
CYLD-204ENST00000562884 ZNF646O15015 1829 aaPredicted RBP11.06□□□□□ -0.64
CYLD-204ENST00000562884 SNAP23O00161 211 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 SLC5A1P13866 664 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 KLRK1P26718 216 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
CYLD-204ENST00000562884 VGLL2Q8N8G2 317 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 LPIN2Q92539 896 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 FAM84BQ96KN1 310 aaPredicted RBP11.05□□□□□ -0.64
CYLD-204ENST00000562884 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 FAM205AQ6ZU69 1335 aa11.05□□□□□ -0.64
CYLD-204ENST00000562884 FRAT2O75474 233 aaPredicted RBP11.04□□□□□ -0.64
CYLD-204ENST00000562884 ATG9AQ7Z3C6 839 aa11.04□□□□□ -0.64
CYLD-204ENST00000562884 FBXO33Q7Z6M2 555 aa11.04□□□□□ -0.64
CYLD-204ENST00000562884 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
CYLD-204ENST00000562884 SULF1Q8IWU6 871 aa11.04□□□□□ -0.64
CYLD-204ENST00000562884 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
CYLD-204ENST00000562884 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
CYLD-204ENST00000562884 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms