RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
CHD9-205ENST00000562785 SLCO4C1Q6ZQN7 724 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 C3orf58Q8NDZ4 430 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 RASSF4Q9H2L5 321 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 GGA1Q9UJY5 639 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
CHD9-205ENST00000562785 NAGPAQ9UK23 515 aa9.07□□□□□ -0.96
CHD9-205ENST00000562785 TRPA1O75762 1119 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 ATP11AP98196 1134 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 FANCCQ00597 558 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 HHIPQ96QV1 700 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
CHD9-205ENST00000562785 PPP4R2Q9NY27 417 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 USP31Q70CQ4 1352 aa9.06□□□□□ -0.96
CHD9-205ENST00000562785 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
CHD9-205ENST00000562785 ELOA3DA6NLF2 546 aaPredicted RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 CPB1P15086 417 aa9.05□□□□□ -0.96
CHD9-205ENST00000562785 ST13P50502 369 aaKnown RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 HDLBPQ00341 1268 aaKnown RBP9.05□□□□□ -0.96
CHD9-205ENST00000562785 ELOA3BQ3SY89 546 aa9.05□□□□□ -0.96
CHD9-205ENST00000562785 ELOA3Q8NG57 546 aa9.05□□□□□ -0.96
CHD9-205ENST00000562785 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
CHD9-205ENST00000562785 FCGRTP55899 365 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
CHD9-205ENST00000562785 PERM1Q5SV97 790 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 MEI1Q5TIA1 1274 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 PLD4Q96BZ4 506 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 LPIN3Q9BQK8 851 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 FRRS1LQ9P0K9 344 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 PPM1HQ9ULR3 514 aa9.04□□□□□ -0.96
CHD9-205ENST00000562785 SHROOM4Q9ULL8 1493 aa9.03□□□□□ -0.96
CHD9-205ENST00000562785 SMNDC1O75940 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD9-205ENST00000562785 ITPKAP23677 461 aa9.03□□□□□ -0.96
CHD9-205ENST00000562785 ZNF76P36508 570 aa9.03□□□□□ -0.96
CHD9-205ENST00000562785 GRIA4P48058 902 aa9.03□□□□□ -0.96
CHD9-205ENST00000562785 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
CHD9-205ENST00000562785 METTL16Q86W50 562 aaKnown RBP9.03□□□□□ -0.96
CHD9-205ENST00000562785 METTL12A8MUP2 240 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 ADAMTS2O95450 1211 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 EPXP11678 715 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 RNF34Q969K3 372 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 ACDQ96AP0 544 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.97
CHD9-205ENST00000562785 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
CHD9-205ENST00000562785 CEP135Q66GS9 1140 aa9.01□□□□□ -0.97
CHD9-205ENST00000562785 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
CHD9-205ENST00000562785 TTC9Q92623 222 aa9.01□□□□□ -0.97
CHD9-205ENST00000562785 SMG9Q9H0W8 520 aaKnown RBP9.01□□□□□ -0.97
CHD9-205ENST00000562785 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
CHD9-205ENST00000562785 A0A096LPE4 126 aa9□□□□□ -0.97
CHD9-205ENST00000562785 A0A1W2PPZ6 126 aa9□□□□□ -0.97
CHD9-205ENST00000562785 SLURP2P0DP57 97 aa9□□□□□ -0.97
CHD9-205ENST00000562785 ALAS2P22557 587 aa9□□□□□ -0.97
CHD9-205ENST00000562785 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
CHD9-205ENST00000562785 LCE2CQ5TA81 110 aa9□□□□□ -0.97
CHD9-205ENST00000562785 MICALL1Q8N3F8 863 aa9□□□□□ -0.97
CHD9-205ENST00000562785 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
CHD9-205ENST00000562785 STARD13Q9Y3M8 1113 aa9□□□□□ -0.97
CHD9-205ENST00000562785 RPS26P11Q5JNZ5 115 aaPredicted RBP8.99□□□□□ -0.97
CHD9-205ENST00000562785 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
CHD9-205ENST00000562785 ASAP3Q8TDY4 903 aa8.99□□□□□ -0.97
CHD9-205ENST00000562785 BSNDQ8WZ55 320 aa8.99□□□□□ -0.97
CHD9-205ENST00000562785 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
CHD9-205ENST00000562785 ZNF576Q9H609 170 aa8.99□□□□□ -0.97
CHD9-205ENST00000562785 PTPRAP18433 802 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 RAD51AP2Q09MP3 1159 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 KANK3Q6NY19 840 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 ADAMTSL4Q6UY14 1074 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 HS2ST1Q7LGA3 356 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 NT5DC4Q86YG4 428 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 NOC4LQ9BVI4 516 aaKnown RBP8.98□□□□□ -0.97
CHD9-205ENST00000562785 MUC3BQ9H195 1237 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 SOX13Q9UN79 622 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 TRIM33Q9UPN9 1127 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 AKAP2Q9Y2D5 859 aa8.98□□□□□ -0.97
CHD9-205ENST00000562785 OIP5O43482 229 aa8.97□□□□□ -0.97
CHD9-205ENST00000562785 RGS9O75916 674 aaPredicted RBP8.97□□□□□ -0.97
CHD9-205ENST00000562785 ERCC5P28715 1186 aaPredicted RBP8.97□□□□□ -0.97
CHD9-205ENST00000562785 C9orf131Q5VYM1 1079 aa8.97□□□□□ -0.97
CHD9-205ENST00000562785 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
CHD9-205ENST00000562785 ALBP02768 609 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 GMPRP36959 345 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 MAP3K10Q02779 954 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 ERMP1Q7Z2K6 904 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 EDARADDQ8WWZ3 215 aa8.96□□□□□ -0.98
CHD9-205ENST00000562785 CLEC4MQ9H2X3 399 aaPredicted RBP8.96□□□□□ -0.98
CHD9-205ENST00000562785 FBXO24O75426 580 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 WFS1O76024 890 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms