RNA–Protein interactions for RNA: ENST00000562339.5

LINC01225-202, Transcript of LINC01225 pseudogene, humanhuman

TSL 1 (best) BASIC

Gene LINC01225, Length 2,113 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-202ENST00000562339 SCARF1Q14162 830 aa17.72■□□□□ 0.43
LINC01225-202ENST00000562339 NIP7Q9Y221 180 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC01225-202ENST00000562339 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
LINC01225-202ENST00000562339 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
LINC01225-202ENST00000562339 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
LINC01225-202ENST00000562339 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
LINC01225-202ENST00000562339 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.42
LINC01225-202ENST00000562339 ZAP70P43403 619 aa17.71■□□□□ 0.42
LINC01225-202ENST00000562339 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.42
LINC01225-202ENST00000562339 RC3H1Q5TC82 1133 aaKnown RBP17.71■□□□□ 0.42
LINC01225-202ENST00000562339 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.42
LINC01225-202ENST00000562339 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.42
LINC01225-202ENST00000562339 OSBP2Q969R2 916 aa17.71■□□□□ 0.42
LINC01225-202ENST00000562339 ATP6V1DQ9Y5K8 247 aa17.71■□□□□ 0.42
LINC01225-202ENST00000562339 CNTNAP4Q9C0A0 1308 aa17.7■□□□□ 0.42
LINC01225-202ENST00000562339 RGL2O15211 777 aa17.7■□□□□ 0.42
LINC01225-202ENST00000562339 F13A1P00488 732 aa17.7■□□□□ 0.42
LINC01225-202ENST00000562339 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
LINC01225-202ENST00000562339 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
LINC01225-202ENST00000562339 RREB1Q92766 1687 aa17.69■□□□□ 0.42
LINC01225-202ENST00000562339 M0R2C6 588 aa17.69■□□□□ 0.42
LINC01225-202ENST00000562339 ONECUT3O60422 494 aaPredicted RBP17.69■□□□□ 0.42
LINC01225-202ENST00000562339 HCLS1P14317 486 aaPredicted RBP17.69■□□□□ 0.42
LINC01225-202ENST00000562339 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
LINC01225-202ENST00000562339 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
LINC01225-202ENST00000562339 MYH3P11055 1940 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 MCAMP43121 646 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 Q6ZUG5 572 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 USP48Q86UV5 1035 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 MROH5Q6ZUA9 1318 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
LINC01225-202ENST00000562339 GDPD2Q9HCC8 539 aa17.68■□□□□ 0.42
LINC01225-202ENST00000562339 DTNBO60941 627 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 PDCP20941 246 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
LINC01225-202ENST00000562339 LPIN2Q92539 896 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 APPBP2Q92624 585 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 TMEM63CQ9P1W3 806 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
LINC01225-202ENST00000562339 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
LINC01225-202ENST00000562339 RPS6KA4O75676 772 aa17.66■□□□□ 0.42
LINC01225-202ENST00000562339 PUM3Q15397 648 aaKnown RBP17.66■□□□□ 0.42
LINC01225-202ENST00000562339 CCNL1Q9UK58 526 aaPredicted RBP17.66■□□□□ 0.42
LINC01225-202ENST00000562339 MYH14Q7Z406 1995 aaKnown RBP17.66■□□□□ 0.42
LINC01225-202ENST00000562339 FGFR2P21802 821 aa17.66■□□□□ 0.42
LINC01225-202ENST00000562339 STK3Q13188 491 aa17.66■□□□□ 0.42
LINC01225-202ENST00000562339 TTF1Q15361 905 aaPredicted RBP17.66■□□□□ 0.42
LINC01225-202ENST00000562339 GTF3C6Q969F1 213 aa17.66■□□□□ 0.42
LINC01225-202ENST00000562339 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC01225-202ENST00000562339 E7EWF7 191 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 NTSR2O95665 410 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 SEPT12Q8IYM1 358 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 MPHOSPH8Q99549 860 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 CNPY2Q9Y2B0 182 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
LINC01225-202ENST00000562339 GADD45BO75293 160 aaPredicted RBP17.65■□□□□ 0.42
LINC01225-202ENST00000562339 ATRNO75882 1429 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 FGD1P98174 961 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
LINC01225-202ENST00000562339 PTF1AQ7RTS3 328 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 BRF1Q92994 677 aa17.65■□□□□ 0.42
LINC01225-202ENST00000562339 PUS7LQ9H0K6 701 aaKnown RBP17.65■□□□□ 0.42
LINC01225-202ENST00000562339 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
LINC01225-202ENST00000562339 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.41
LINC01225-202ENST00000562339 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.41
LINC01225-202ENST00000562339 KCNQ4P56696 695 aa17.64■□□□□ 0.41
LINC01225-202ENST00000562339 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
LINC01225-202ENST00000562339 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
LINC01225-202ENST00000562339 AGXT2Q9BYV1 514 aa17.64■□□□□ 0.41
LINC01225-202ENST00000562339 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 FOXP2O15409 715 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 ZPR1O75312 459 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
LINC01225-202ENST00000562339 PHKA1P46020 1223 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
LINC01225-202ENST00000562339 COL5A3P25940 1745 aaPredicted RBP17.63■□□□□ 0.41
LINC01225-202ENST00000562339 FGAP02671 866 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 ADD2P35612 726 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 LRP5O75197 1615 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 RTL9Q8NET4 1388 aa17.63■□□□□ 0.41
LINC01225-202ENST00000562339 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
LINC01225-202ENST00000562339 SLC9C2Q5TAH2 1124 aa17.62■□□□□ 0.41
LINC01225-202ENST00000562339 SYAP1Q96A49 352 aaPredicted RBP17.62■□□□□ 0.41
LINC01225-202ENST00000562339 GNPATO15228 680 aa17.62■□□□□ 0.41
LINC01225-202ENST00000562339 GPAA1O43292 621 aa17.62■□□□□ 0.41
LINC01225-202ENST00000562339 SLC5A1P13866 664 aa17.62■□□□□ 0.41
LINC01225-202ENST00000562339 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms