RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 TNNQ9UQP3 1299 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 MED23Q9ULK4 1368 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 CELF2O95319 508 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 VEGFBP49765 207 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 CST9Q5W186 159 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 DPF2Q92785 391 aa11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-203ENST00000562039 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 GTF2IP78347 998 aa11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 LRRC24Q50LG9 513 aa11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 JMYQ8N9B5 988 aa11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 USP44Q9H0E7 712 aa11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
NSMCE1-203ENST00000562039 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 F8W031 263 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 BCAR3O75815 825 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 SCARF1Q14162 830 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 PODNQ7Z5L7 613 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 COA1Q9GZY4 146 aa11.92□□□□□ -0.5
NSMCE1-203ENST00000562039 UTYO14607 1347 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 SASH1O94885 1247 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 GYG1P46976 350 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 TTLL5Q6EMB2 1281 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 KRT26Q7Z3Y9 468 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 CLUAP1Q96AJ1 413 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 DCPSQ96C86 337 aaKnown RBP11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 IQSEC3Q9UPP2 1182 aaPredicted RBP11.91□□□□□ -0.5
NSMCE1-203ENST00000562039 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 TRPM7Q96QT4 1865 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 GMLQ99445 158 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 SIL1Q9H173 461 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 PCDHAC2Q9Y5I4 1007 aa11.9□□□□□ -0.5
NSMCE1-203ENST00000562039 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 AOC2O75106 756 aa11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 RABL6Q3YEC7 729 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 MEIS3Q99687 375 aa11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-203ENST00000562039 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 PSME4Q14997 1843 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 CT47B1P0C2W7 299 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 ZNF804AQ7Z570 1209 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 CERS5Q8N5B7 392 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 CAPNS2Q96L46 248 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 PA2G4Q9UQ80 394 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
NSMCE1-203ENST00000562039 PCNTO95613 3336 aa11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 FOXN1O15353 648 aa11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 CHAF1AQ13111 956 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 OGFOD1Q8N543 542 aa11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 ZNF646O15015 1829 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-203ENST00000562039 TRIM27P14373 513 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 HUNKP57058 714 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 PRKG1Q13976 671 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 ZIC5Q96T25 663 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 AOX1Q06278 1338 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms