RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 NEUROD6Q96NK8 337 aa16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 ATL3Q6DD88 541 aa16.32■□□□□ 0.2
VPS9D1-202ENST00000561976 GOLIM4O00461 696 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 PDE4CQ08493 712 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 MRC1P22897 1456 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 GSDMDP57764 484 aa16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-202ENST00000561976 A0A1B0GVL5 298 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 A0A087WZG4 1122 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 NPHP1O15259 732 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 SMC2O95347 1197 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 ELF2Q15723 593 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 KMT5BQ4FZB7 885 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
VPS9D1-202ENST00000561976 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 E7EWF7 191 aa16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 SLU7O95391 586 aaKnown RBP16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
VPS9D1-202ENST00000561976 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 STK38Q15208 465 aa16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 KIF2AO00139 706 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 FMR1NBQ8N0W7 255 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
VPS9D1-202ENST00000561976 NDUFA8P51970 172 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 LMBR1LQ6UX01 489 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 FBXO38Q6PIJ6 1188 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 NBPF11Q86T75 865 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
VPS9D1-202ENST00000561976 BIN1O00499 593 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 POLR3DP05423 398 aaPredicted RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 DPCR1Q3MIW9 517 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 XPO4Q9C0E2 1151 aaKnown RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 KIAA1468Q9P260 1216 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 TPM4P67936 248 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 AGXT2Q9BYV1 514 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 NRDCO43847 1150 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 TIMM10P62072 90 aa16.26■□□□□ 0.19
VPS9D1-202ENST00000561976 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
VPS9D1-202ENST00000561976 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
VPS9D1-202ENST00000561976 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
VPS9D1-202ENST00000561976 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
VPS9D1-202ENST00000561976 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
VPS9D1-202ENST00000561976 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 E4F1Q66K89 784 aaPredicted RBP16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 LINC00301Q8NCQ3 95 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 PPP1R13BQ96KQ4 1090 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
VPS9D1-202ENST00000561976 SPTLC2O15270 562 aa16.23■□□□□ 0.19
VPS9D1-202ENST00000561976 ARMCX5Q6P1M9 558 aa16.23■□□□□ 0.19
VPS9D1-202ENST00000561976 ORAI2Q96SN7 254 aa16.23■□□□□ 0.19
VPS9D1-202ENST00000561976 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms