RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 APAF1O14727 1248 aa15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 PCCAP05165 728 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 HOXB7P09629 217 aa15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 CWF19L2Q2TBE0 894 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
NSMCE1-202ENST00000561960 SNAP23O00161 211 aa15.1■□□□□ 0.01
NSMCE1-202ENST00000561960 CTSWP56202 376 aa15.1■□□□□ 0.01
NSMCE1-202ENST00000561960 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-202ENST00000561960 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-202ENST00000561960 PCDHAC2Q9Y5I4 1007 aa15.1■□□□□ 0.01
NSMCE1-202ENST00000561960 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 CCDC191Q8NCU4 936 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 METTL22Q9BUU2 404 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 OTOFQ9HC10 1997 aa15.09■□□□□ 0.01
NSMCE1-202ENST00000561960 WNT10BO00744 389 aa15.08■□□□□ 0
NSMCE1-202ENST00000561960 ZNF853P0CG23 659 aa15.08■□□□□ 0
NSMCE1-202ENST00000561960 ATP2B4P23634 1241 aa15.08■□□□□ 0
NSMCE1-202ENST00000561960 PTPN12Q05209 780 aaKnown RBP15.08■□□□□ 0
NSMCE1-202ENST00000561960 DACT2Q5SW24 774 aa15.08■□□□□ 0
NSMCE1-202ENST00000561960 G2E3Q7L622 706 aa15.08■□□□□ 0
NSMCE1-202ENST00000561960 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
NSMCE1-202ENST00000561960 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
NSMCE1-202ENST00000561960 UBE3BQ7Z3V4 1068 aa15.07■□□□□ 0
NSMCE1-202ENST00000561960 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
NSMCE1-202ENST00000561960 TTLL11Q8NHH1 800 aa15.07■□□□□ 0
NSMCE1-202ENST00000561960 F8W031 263 aaPredicted RBP15.06■□□□□ 0
NSMCE1-202ENST00000561960 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
NSMCE1-202ENST00000561960 IFT57Q9NWB7 429 aa15.06■□□□□ 0
NSMCE1-202ENST00000561960 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
NSMCE1-202ENST00000561960 PITPNM2Q9BZ72 1349 aa15.06■□□□□ 0
NSMCE1-202ENST00000561960 MED23Q9ULK4 1368 aa15.06■□□□□ 0
NSMCE1-202ENST00000561960 ZNF609O15014 1411 aa15.06■□□□□ 0
NSMCE1-202ENST00000561960 ZSWIM8A7E2V4 1837 aa15.06■□□□□ 0
NSMCE1-202ENST00000561960 GPR25O00155 361 aa15.05■□□□□ -0
NSMCE1-202ENST00000561960 GTF2IP78347 998 aa15.05■□□□□ -0
NSMCE1-202ENST00000561960 HELBQ8NG08 1087 aaPredicted RBP15.05■□□□□ -0
NSMCE1-202ENST00000561960 CLMNQ96JQ2 1002 aa15.05■□□□□ -0
NSMCE1-202ENST00000561960 AOX1Q06278 1338 aa15.05■□□□□ -0
NSMCE1-202ENST00000561960 SSC5DA1L4H1 1573 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 CLRN2A0PK11 232 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 GNAI1P63096 354 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 FKBP1BP68106 108 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 PODNQ7Z5L7 613 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 OGFOD1Q8N543 542 aa15.04■□□□□ -0
NSMCE1-202ENST00000561960 TAF5LO75529 589 aa15.03■□□□□ -0
NSMCE1-202ENST00000561960 DDX58O95786 925 aaKnown RBP15.03■□□□□ -0
NSMCE1-202ENST00000561960 PRPF38BQ5VTL8 546 aaKnown RBP15.03■□□□□ -0
NSMCE1-202ENST00000561960 CCDC30Q5VVM6 783 aa15.03■□□□□ -0
NSMCE1-202ENST00000561960 TTLL5Q6EMB2 1281 aa15.03■□□□□ -0
NSMCE1-202ENST00000561960 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
NSMCE1-202ENST00000561960 ZNF804BA4D1E1 1349 aa15.02■□□□□ -0
NSMCE1-202ENST00000561960 NEURL1BA8MQ27 555 aa15.02■□□□□ -0
NSMCE1-202ENST00000561960 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
NSMCE1-202ENST00000561960 ITGA6P23229 1130 aa15.02■□□□□ -0
NSMCE1-202ENST00000561960 NF2P35240 595 aa15.02■□□□□ -0
NSMCE1-202ENST00000561960 KSR2Q6VAB6 950 aa15.02■□□□□ -0
NSMCE1-202ENST00000561960 POTEFA5A3E0 1075 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 FKTNO75072 461 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 IGHMBP2P38935 993 aaKnown RBP15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 KCNJ4P48050 445 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 TM4SF4P48230 202 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 CCDC184Q52MB2 194 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 CERS5Q8N5B7 392 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 TRIM17Q9Y577 477 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 LAMB1P07942 1786 aa15.01□□□□□ -0.01
NSMCE1-202ENST00000561960 KIAA0100Q14667 2235 aaKnown RBP15□□□□□ -0.01
NSMCE1-202ENST00000561960 PLIN1O60240 522 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 ECM2O94769 699 aaPredicted RBP15□□□□□ -0.01
NSMCE1-202ENST00000561960 CHRNDQ07001 517 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 SPRYD7Q5W111 196 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 COA1Q9GZY4 146 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 VEZTQ9HBM0 779 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
NSMCE1-202ENST00000561960 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
NSMCE1-202ENST00000561960 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 MYCP01106 439 aaPredicted RBP14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 CAP1Q01518 475 aa14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 SREBF2Q12772 1141 aa14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 FBXO46Q6PJ61 603 aaPredicted RBP14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 CD99L2Q8TCZ2 262 aa14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 MPHOSPH8Q99549 860 aa14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 DEFB129Q9H1M3 183 aa14.99□□□□□ -0.01
NSMCE1-202ENST00000561960 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 GJA5P36382 358 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 DLGAP5Q15398 846 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 APOBEC3FQ8IUX4 373 aaKnown RBP14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 SLC10A4Q96EP9 437 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 STK31Q9BXU1 1019 aa14.98□□□□□ -0.01
NSMCE1-202ENST00000561960 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms