RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 DBNDD2Q9BQY9 259 aa28.59■■■□□ 2.17
TMEM249-201ENST00000561638 DBNLQ9UJU6 430 aaKnown RBP28.59■■■□□ 2.17
TMEM249-201ENST00000561638 ADORA1P30542 326 aa28.58■■■□□ 2.17
TMEM249-201ENST00000561638 VPS37DQ86XT2 251 aa28.58■■■□□ 2.17
TMEM249-201ENST00000561638 SUPT20HQ8NEM7 779 aa28.58■■■□□ 2.17
TMEM249-201ENST00000561638 GPATCH3Q96I76 525 aa28.58■■■□□ 2.17
TMEM249-201ENST00000561638 LTBP1Q14766 1721 aa28.57■■■□□ 2.16
TMEM249-201ENST00000561638 CAVIN4Q5BKX8 364 aa28.57■■■□□ 2.16
TMEM249-201ENST00000561638 OTUD7AQ8TE49 926 aaPredicted RBP28.57■■■□□ 2.16
TMEM249-201ENST00000561638 EYA3Q99504 573 aa28.57■■■□□ 2.16
TMEM249-201ENST00000561638 KLRK1P26718 216 aa28.57■■■□□ 2.16
TMEM249-201ENST00000561638 DUOX1Q9NRD9 1551 aa28.56■■■□□ 2.16
TMEM249-201ENST00000561638 MX1P20591 662 aa28.56■■■□□ 2.16
TMEM249-201ENST00000561638 WASHC4Q2M389 1173 aa28.56■■■□□ 2.16
TMEM249-201ENST00000561638 ZC3H12CQ9C0D7 883 aaKnown RBP28.56■■■□□ 2.16
TMEM249-201ENST00000561638 TAOK3Q9H2K8 898 aa28.56■■■□□ 2.16
TMEM249-201ENST00000561638 ARFGEF1Q9Y6D6 1849 aa28.56■■■□□ 2.16
TMEM249-201ENST00000561638 RIMBP2O15034 1052 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 CCDC158Q5M9N0 1113 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 PSMD1Q99460 953 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 RTFDC1Q9BY42 306 aaPredicted RBP28.55■■■□□ 2.16
TMEM249-201ENST00000561638 SNED1Q8TER0 1413 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 GYG1P46976 350 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 FKBP4Q02790 459 aaKnown RBP eCLIP28.55■■■□□ 2.16
TMEM249-201ENST00000561638 GPR162Q16538 588 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 SKAP1Q86WV1 359 aa28.55■■■□□ 2.16
TMEM249-201ENST00000561638 MED23Q9ULK4 1368 aa28.54■■■□□ 2.16
TMEM249-201ENST00000561638 RGS3P49796 1198 aa28.54■■■□□ 2.16
TMEM249-201ENST00000561638 PDE4AP27815 886 aa28.53■■■□□ 2.16
TMEM249-201ENST00000561638 TXNRD3Q86VQ6 643 aa28.53■■■□□ 2.16
TMEM249-201ENST00000561638 G3V3G9 751 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 YBX3P16989 372 aaKnown RBP eCLIP28.52■■■□□ 2.16
TMEM249-201ENST00000561638 TTC39AQ5SRH9 613 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 DCAF8Q5TAQ9 597 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 ARHGAP27Q6ZUM4 889 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 ZNF804AQ7Z570 1209 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 ECHDC1Q9NTX5 307 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 BCAMP50895 628 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 TSHZ3Q63HK5 1081 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 CCDC102BQ68D86 513 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 ZNF277Q9NRM2 450 aaPredicted RBP28.52■■■□□ 2.16
TMEM249-201ENST00000561638 ARAP2Q8WZ64 1704 aa28.52■■■□□ 2.16
TMEM249-201ENST00000561638 UTRNP46939 3433 aa28.51■■■□□ 2.15
TMEM249-201ENST00000561638 PPIP5K2O43314 1243 aa28.51■■■□□ 2.15
TMEM249-201ENST00000561638 HIBADHP31937 336 aaKnown RBP28.51■■■□□ 2.15
TMEM249-201ENST00000561638 FAM84BQ96KN1 310 aaPredicted RBP28.51■■■□□ 2.15
TMEM249-201ENST00000561638 GNL3LQ9NVN8 582 aaKnown RBP28.51■■■□□ 2.15
TMEM249-201ENST00000561638 C15orf52Q6ZUT6 534 aaKnown RBP28.5■■■□□ 2.15
TMEM249-201ENST00000561638 PLEKHM2Q8IWE5 1019 aa28.5■■■□□ 2.15
TMEM249-201ENST00000561638 NFKBIEO00221 500 aa28.5■■■□□ 2.15
TMEM249-201ENST00000561638 FRAT2O75474 233 aaPredicted RBP28.5■■■□□ 2.15
TMEM249-201ENST00000561638 PHKA1P46020 1223 aa28.5■■■□□ 2.15
TMEM249-201ENST00000561638 PDE1AP54750 535 aa28.5■■■□□ 2.15
TMEM249-201ENST00000561638 AOC3Q16853 763 aa28.5■■■□□ 2.15
TMEM249-201ENST00000561638 TTC41PQ6P2S7 1318 aa28.49■■■□□ 2.15
TMEM249-201ENST00000561638 FER1L6Q2WGJ9 1857 aa28.49■■■□□ 2.15
TMEM249-201ENST00000561638 IRS2Q9Y4H2 1338 aa28.48■■■□□ 2.15
TMEM249-201ENST00000561638 ERC2O15083 957 aa28.48■■■□□ 2.15
TMEM249-201ENST00000561638 KIAA2012Q0VF49 1180 aa28.48■■■□□ 2.15
TMEM249-201ENST00000561638 SALL3Q9BXA9 1300 aa28.48■■■□□ 2.15
TMEM249-201ENST00000561638 RASSF7Q02833 373 aa28.47■■■□□ 2.15
TMEM249-201ENST00000561638 FBXO33Q7Z6M2 555 aa28.47■■■□□ 2.15
TMEM249-201ENST00000561638 LARGE2Q8N3Y3 721 aa28.47■■■□□ 2.15
TMEM249-201ENST00000561638 IQSEC3Q9UPP2 1182 aaPredicted RBP28.47■■■□□ 2.15
TMEM249-201ENST00000561638 UQCRFS1P1P0C7P4 283 aa28.47■■■□□ 2.15
TMEM249-201ENST00000561638 LTBP3Q9NS15 1303 aa28.46■■■□□ 2.15
TMEM249-201ENST00000561638 IARSP41252 1262 aaKnown RBP28.46■■■□□ 2.15
TMEM249-201ENST00000561638 DOK7Q18PE1 504 aa28.46■■■□□ 2.15
TMEM249-201ENST00000561638 STAP2Q9UGK3 403 aa28.46■■■□□ 2.15
TMEM249-201ENST00000561638 COA1Q9GZY4 146 aa28.45■■■□□ 2.15
TMEM249-201ENST00000561638 VPS33BQ9H267 617 aa28.45■■■□□ 2.15
TMEM249-201ENST00000561638 GLRX3O76003 335 aaKnown RBP28.45■■■□□ 2.14
TMEM249-201ENST00000561638 DBNDD1Q9H9R9 158 aa28.45■■■□□ 2.14
TMEM249-201ENST00000561638 ATP5JP18859 108 aa28.44■■■□□ 2.14
TMEM249-201ENST00000561638 BOLA2Q9H3K6 86 aa28.44■■■□□ 2.14
TMEM249-201ENST00000561638 CD209Q9NNX6 404 aa28.44■■■□□ 2.14
TMEM249-201ENST00000561638 GRIN3BO60391 1043 aa28.43■■■□□ 2.14
TMEM249-201ENST00000561638 ARID4AP29374 1257 aaPredicted RBP28.43■■■□□ 2.14
TMEM249-201ENST00000561638 AOX1Q06278 1338 aa28.43■■■□□ 2.14
TMEM249-201ENST00000561638 JDP2Q8WYK2 163 aa28.42■■■□□ 2.14
TMEM249-201ENST00000561638 ZNF512BQ96KM6 892 aaPredicted RBP28.42■■■□□ 2.14
TMEM249-201ENST00000561638 OSBPL3Q9H4L5 887 aa28.42■■■□□ 2.14
TMEM249-201ENST00000561638 RASGRF1Q13972 1273 aa28.42■■■□□ 2.14
TMEM249-201ENST00000561638 NIM1KQ8IY84 436 aa28.42■■■□□ 2.14
TMEM249-201ENST00000561638 PI4K2BQ8TCG2 481 aa28.42■■■□□ 2.14
TMEM249-201ENST00000561638 DNAJC2Q99543 621 aaKnown RBP28.42■■■□□ 2.14
TMEM249-201ENST00000561638 ECE2O60344 883 aa28.41■■■□□ 2.14
TMEM249-201ENST00000561638 MCAMP43121 646 aa28.41■■■□□ 2.14
TMEM249-201ENST00000561638 SNRKQ9NRH2 765 aa28.41■■■□□ 2.14
TMEM249-201ENST00000561638 SEMA3EO15041 775 aa28.4■■■□□ 2.14
TMEM249-201ENST00000561638 SCARF1Q14162 830 aa28.4■■■□□ 2.14
TMEM249-201ENST00000561638 SPATA5Q8NB90 893 aa28.4■■■□□ 2.14
TMEM249-201ENST00000561638 DENND2AQ9ULE3 1009 aa28.4■■■□□ 2.14
TMEM249-201ENST00000561638 DCAF8L1A6NGE4 600 aa28.39■■■□□ 2.14
TMEM249-201ENST00000561638 IL1R1P14778 569 aa28.39■■■□□ 2.14
TMEM249-201ENST00000561638 PI16Q6UXB8 463 aa28.39■■■□□ 2.14
TMEM249-201ENST00000561638 PODNQ7Z5L7 613 aa28.39■■■□□ 2.14
TMEM249-201ENST00000561638 TDRD7Q8NHU6 1098 aaKnown RBP28.39■■■□□ 2.14
TMEM249-201ENST00000561638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.39■■■□□ 2.14
TMEM249-201ENST00000561638 LMNB1P20700 586 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms