RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 POTEJP0CG39 1038 aa16.49■□□□□ 0.23
RPAP1-203ENST00000561631 MS4A1P11836 297 aa16.49■□□□□ 0.23
RPAP1-203ENST00000561631 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
RPAP1-203ENST00000561631 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
RPAP1-203ENST00000561631 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
RPAP1-203ENST00000561631 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
RPAP1-203ENST00000561631 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 USP17L3A6NCW0 530 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 USP17L4A6NCW7 530 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 KLRK1P26718 216 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 USP17L1Q7RTZ2 530 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
RPAP1-203ENST00000561631 GNAI2P04899 355 aa16.47■□□□□ 0.23
RPAP1-203ENST00000561631 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
RPAP1-203ENST00000561631 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
RPAP1-203ENST00000561631 DPF2Q92785 391 aa16.47■□□□□ 0.23
RPAP1-203ENST00000561631 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
RPAP1-203ENST00000561631 CNOT7Q9UIV1 285 aaKnown RBP16.47■□□□□ 0.23
RPAP1-203ENST00000561631 WTIPA6NIX2 430 aaPredicted RBP16.46■□□□□ 0.23
RPAP1-203ENST00000561631 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
RPAP1-203ENST00000561631 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
RPAP1-203ENST00000561631 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
RPAP1-203ENST00000561631 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
RPAP1-203ENST00000561631 SIL1Q9H173 461 aa16.46■□□□□ 0.23
RPAP1-203ENST00000561631 SNAP23O00161 211 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 EYA2O00167 538 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 VIL1P09327 827 aaKnown RBP16.45■□□□□ 0.22
RPAP1-203ENST00000561631 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
RPAP1-203ENST00000561631 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 MAP1SQ66K74 1059 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-203ENST00000561631 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
RPAP1-203ENST00000561631 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 TRPM7Q96QT4 1865 aa16.45■□□□□ 0.22
RPAP1-203ENST00000561631 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
RPAP1-203ENST00000561631 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
RPAP1-203ENST00000561631 KIF4BQ2VIQ3 1234 aa16.44■□□□□ 0.22
RPAP1-203ENST00000561631 CAVIN4Q5BKX8 364 aa16.44■□□□□ 0.22
RPAP1-203ENST00000561631 OGFOD1Q8N543 542 aa16.44■□□□□ 0.22
RPAP1-203ENST00000561631 CD209Q9NNX6 404 aa16.44■□□□□ 0.22
RPAP1-203ENST00000561631 CIAO1O76071 339 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 PDE8BO95263 885 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 SLC5A1P13866 664 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
RPAP1-203ENST00000561631 TBC1D10BQ4KMP7 808 aaPredicted RBP16.43■□□□□ 0.22
RPAP1-203ENST00000561631 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
RPAP1-203ENST00000561631 SHTN1A0MZ66 631 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
RPAP1-203ENST00000561631 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 IL15P40933 162 aaPredicted RBP16.42■□□□□ 0.22
RPAP1-203ENST00000561631 GTF2IP78347 998 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 MTX1Q13505 466 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
RPAP1-203ENST00000561631 RLBP1P12271 317 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 HIBADHP31937 336 aaKnown RBP16.41■□□□□ 0.22
RPAP1-203ENST00000561631 DACT2Q5SW24 774 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 RBM26Q5T8P6 1007 aaKnown RBP16.41■□□□□ 0.22
RPAP1-203ENST00000561631 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
RPAP1-203ENST00000561631 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 PA2G4Q9UQ80 394 aaKnown RBP16.41■□□□□ 0.22
RPAP1-203ENST00000561631 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
RPAP1-203ENST00000561631 IL1R1P14778 569 aa16.4■□□□□ 0.22
RPAP1-203ENST00000561631 GYG1P46976 350 aa16.4■□□□□ 0.22
RPAP1-203ENST00000561631 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
RPAP1-203ENST00000561631 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
RPAP1-203ENST00000561631 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
RPAP1-203ENST00000561631 OS9Q13438 667 aaPredicted RBP16.39■□□□□ 0.21
RPAP1-203ENST00000561631 KIAA0825Q8IV33 1275 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 LPIN2Q92539 896 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
RPAP1-203ENST00000561631 C1orf115Q9H7X2 142 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 GGA3Q9NZ52 723 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
RPAP1-203ENST00000561631 MMP14P50281 582 aa16.38■□□□□ 0.21
RPAP1-203ENST00000561631 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
RPAP1-203ENST00000561631 MVPQ14764 893 aaKnown RBP16.38■□□□□ 0.21
RPAP1-203ENST00000561631 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
RPAP1-203ENST00000561631 MXD3Q9BW11 206 aa16.38■□□□□ 0.21
RPAP1-203ENST00000561631 CREBZFQ9NS37 354 aa16.38■□□□□ 0.21
RPAP1-203ENST00000561631 JAG2Q9Y219 1238 aa16.38■□□□□ 0.21
RPAP1-203ENST00000561631 TMEM88BA6NKF7 163 aa16.37■□□□□ 0.21
RPAP1-203ENST00000561631 HTRA3P83110 453 aa16.37■□□□□ 0.21
RPAP1-203ENST00000561631 CHAF1AQ13111 956 aaPredicted RBP16.37■□□□□ 0.21
RPAP1-203ENST00000561631 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPAP1-203ENST00000561631 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
RPAP1-203ENST00000561631 SULF1Q8IWU6 871 aa16.37■□□□□ 0.21
RPAP1-203ENST00000561631 GMLQ99445 158 aa16.37■□□□□ 0.21
RPAP1-203ENST00000561631 PNMA6EA0A0J9YXQ4 647 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms