RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 NEURL1BA8MQ27 555 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 USP17L8P0C7I0 530 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 CASP7P55210 303 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 KIF23Q02241 960 aaPredicted RBP10.8□□□□□ -0.68
PALB2-202ENST00000561514 SCARF1Q14162 830 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 DACT2Q5SW24 774 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 USP17L1Q7RTZ2 530 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 RASAL3Q86YV0 1011 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
PALB2-202ENST00000561514 GREM2Q9H772 168 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 MYOZ2Q9NPC6 264 aa10.8□□□□□ -0.68
PALB2-202ENST00000561514 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 ZNF157P51786 506 aaPredicted RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 RBM26Q5T8P6 1007 aaKnown RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 ANGEL2Q5VTE6 544 aaKnown RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 WWC1Q8IX03 1113 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 JARID2Q92833 1246 aaPredicted RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
PALB2-202ENST00000561514 COA1Q9GZY4 146 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 PSME4Q14997 1843 aa10.79□□□□□ -0.68
PALB2-202ENST00000561514 CSF1RP07333 972 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 CCT4P50991 539 aaKnown RBP10.78□□□□□ -0.68
PALB2-202ENST00000561514 NEXNQ0ZGT2 675 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
PALB2-202ENST00000561514 STRIP1Q5VSL9 837 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 G2E3Q7L622 706 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 ZBED3Q96IU2 234 aaPredicted RBP10.78□□□□□ -0.68
PALB2-202ENST00000561514 CCDC85AQ96PX6 553 aaPredicted RBP10.78□□□□□ -0.68
PALB2-202ENST00000561514 CSRNP1Q96S65 589 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 STK31Q9BXU1 1019 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 RNF186Q9NXI6 227 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 LEMD3Q9Y2U8 911 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 IRS2Q9Y4H2 1338 aa10.78□□□□□ -0.68
PALB2-202ENST00000561514 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 G3V3G9 751 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 SLC34A2O95436 690 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.69
PALB2-202ENST00000561514 FLIIQ13045 1269 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 DGKZQ13574 1117 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 GCKRQ14397 625 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 TWISTNBQ3B726 338 aaPredicted RBP10.77□□□□□ -0.69
PALB2-202ENST00000561514 NOM1Q5C9Z4 860 aaKnown RBP10.77□□□□□ -0.69
PALB2-202ENST00000561514 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.69
PALB2-202ENST00000561514 C15orf52Q6ZUT6 534 aaKnown RBP10.77□□□□□ -0.69
PALB2-202ENST00000561514 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.69
PALB2-202ENST00000561514 WNT10BO00744 389 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 CCDC184Q52MB2 194 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 TXNRD3Q86VQ6 643 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 LINS1Q8NG48 757 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 CFHR5Q9BXR6 569 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 ANKRD2Q9GZV1 360 aa10.76□□□□□ -0.69
PALB2-202ENST00000561514 COL1A1P02452 1464 aaPredicted RBP10.75□□□□□ -0.69
PALB2-202ENST00000561514 TRPA1O75762 1119 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 ITGA6P23229 1130 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 KLRK1P26718 216 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
PALB2-202ENST00000561514 NBPF9Q3BBW0 867 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 DNAAF4Q8WXU2 420 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 ZNF804BA4D1E1 1349 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 FANCIQ9NVI1 1328 aa10.75□□□□□ -0.69
PALB2-202ENST00000561514 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
PALB2-202ENST00000561514 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
PALB2-202ENST00000561514 CTU1Q7Z7A3 348 aaKnown RBP10.74□□□□□ -0.69
PALB2-202ENST00000561514 OGFOD1Q8N543 542 aa10.74□□□□□ -0.69
PALB2-202ENST00000561514 MTMR14Q8NCE2 650 aa10.74□□□□□ -0.69
PALB2-202ENST00000561514 MXD3Q9BW11 206 aa10.74□□□□□ -0.69
PALB2-202ENST00000561514 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
PALB2-202ENST00000561514 VAMP4O75379 141 aa10.73□□□□□ -0.69
PALB2-202ENST00000561514 TM4SF4P48230 202 aa10.73□□□□□ -0.69
PALB2-202ENST00000561514 LDLRAD1Q5T700 205 aa10.73□□□□□ -0.69
PALB2-202ENST00000561514 MOB2Q70IA6 237 aa10.73□□□□□ -0.69
PALB2-202ENST00000561514 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
PALB2-202ENST00000561514 WDR63Q8IWG1 891 aa10.73□□□□□ -0.69
PALB2-202ENST00000561514 CASP8AP2Q9UKL3 1982 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 SASH1O94885 1247 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 FKBP1AP62942 108 aaKnown RBP10.72□□□□□ -0.69
PALB2-202ENST00000561514 FOXO4P98177 505 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 CHRNDQ07001 517 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 TTLL5Q6EMB2 1281 aa10.72□□□□□ -0.69
PALB2-202ENST00000561514 SSC5DA1L4H1 1573 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 UNCXA6NJT0 531 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 IL1R1P14778 569 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
PALB2-202ENST00000561514 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
PALB2-202ENST00000561514 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.69
PALB2-202ENST00000561514 CERS5Q8N5B7 392 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 MPHOSPH8Q99549 860 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 CD209Q9NNX6 404 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 SPINK5Q9NQ38 1064 aaPredicted RBP10.71□□□□□ -0.69
PALB2-202ENST00000561514 HDAC9Q9UKV0 1011 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
PALB2-202ENST00000561514 POLR2AP24928 1970 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms