RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 EYA2O00167 538 aa17.38■□□□□ 0.37
TPM1-230ENST00000561266 GNAI2P04899 355 aa17.38■□□□□ 0.37
TPM1-230ENST00000561266 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
TPM1-230ENST00000561266 MTX1Q13505 466 aa17.38■□□□□ 0.37
TPM1-230ENST00000561266 TNIP1Q15025 636 aa17.38■□□□□ 0.37
TPM1-230ENST00000561266 C15orf52Q6ZUT6 534 aaKnown RBP17.38■□□□□ 0.37
TPM1-230ENST00000561266 POLR2AP24928 1970 aaKnown RBP17.37■□□□□ 0.37
TPM1-230ENST00000561266 EGFRP00533 1210 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 KCNJ4P48050 445 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
TPM1-230ENST00000561266 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
TPM1-230ENST00000561266 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 G3V3G9 751 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 PDE8BO95263 885 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 FGFR2P21802 821 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 GYG1P46976 350 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 HIRAP54198 1017 aaPredicted RBP17.36■□□□□ 0.37
TPM1-230ENST00000561266 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
TPM1-230ENST00000561266 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 FAM84BQ96KN1 310 aaPredicted RBP17.36■□□□□ 0.37
TPM1-230ENST00000561266 GMLQ99445 158 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 COA1Q9GZY4 146 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
TPM1-230ENST00000561266 CNOT7Q9UIV1 285 aaKnown RBP17.36■□□□□ 0.37
TPM1-230ENST00000561266 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
TPM1-230ENST00000561266 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
TPM1-230ENST00000561266 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 POLA2Q14181 598 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
TPM1-230ENST00000561266 RSBN1LQ6PCB5 846 aaPredicted RBP17.34■□□□□ 0.37
TPM1-230ENST00000561266 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
TPM1-230ENST00000561266 CIAO1O76071 339 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 IL1R1P14778 569 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.36
TPM1-230ENST00000561266 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 SMC1BQ8NDV3 1235 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 DPF2Q92785 391 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 HDAC5Q9UQL6 1122 aa17.33■□□□□ 0.36
TPM1-230ENST00000561266 GTF2IP78347 998 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.36
TPM1-230ENST00000561266 FSTL1Q12841 308 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
TPM1-230ENST00000561266 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
TPM1-230ENST00000561266 ADARB2Q9NS39 739 aaKnown RBP17.32■□□□□ 0.36
TPM1-230ENST00000561266 ZNF609O15014 1411 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
TPM1-230ENST00000561266 BCAMP50895 628 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 HTRA3P83110 453 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 TBC1D10BQ4KMP7 808 aaPredicted RBP17.31■□□□□ 0.36
TPM1-230ENST00000561266 STRIP1Q5VSL9 837 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
TPM1-230ENST00000561266 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
TPM1-230ENST00000561266 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
TPM1-230ENST00000561266 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
TPM1-230ENST00000561266 SASH1O94885 1247 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 HSPA6P17066 643 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 HIBADHP31937 336 aaKnown RBP17.3■□□□□ 0.36
TPM1-230ENST00000561266 TFCP2Q12800 502 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
TPM1-230ENST00000561266 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 DLK2Q6UY11 383 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
TPM1-230ENST00000561266 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
TPM1-230ENST00000561266 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
TPM1-230ENST00000561266 RPS12P25398 132 aaKnown RBP17.29■□□□□ 0.36
TPM1-230ENST00000561266 ADORA1P30542 326 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
TPM1-230ENST00000561266 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
TPM1-230ENST00000561266 ZNF804AQ7Z570 1209 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
TPM1-230ENST00000561266 PASKQ96RG2 1323 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 H7C1D1 291 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 MS4A1P11836 297 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 ZNF280AP59817 542 aaPredicted RBP17.28■□□□□ 0.36
TPM1-230ENST00000561266 TIMM10P62072 90 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 GRIK5Q16478 980 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
TPM1-230ENST00000561266 PCDHAC2Q9Y5I4 1007 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms