RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	LNPK	Q9C0E8	428 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	ANKRD2	Q9GZV1	360 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	RWDD1	Q9H446	243 aa	Predicted RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	DBNDD1	Q9H9R9	158 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	KCNQ5	Q9NR82	932 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	DBNL	Q9UJU6	430 aa	Known RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	FPGT-TNNI3K	V9GXZ4	949 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	ZNF646	O15015	1829 aa	Predicted RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	PPIP5K2	O43314	1243 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	ATP2B4	P23634	1241 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	PHKA1	P46020	1223 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	ANKRD45	Q5TZF3	282 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	RTKN2	Q8IZC4	609 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	CCDC136	Q96JN2	1154 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	PPP4R2	Q9NY27	417 aa		13.91	□□□□□ -0.18
CERS3-208	ENST00000560944	PDE4A	P27815	886 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	BCAM	P50895	628 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	KIF1BP	Q96EK5	621 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	XAGE2	Q96GT9	111 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	NEUROD6	Q96NK8	337 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	PSMD1	Q99460	953 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	LRRCC1	Q9C099	1032 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	FBXO3	Q9UK99	471 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	NDUFB9	Q9Y6M9	179 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	MED23	Q9ULK4	1368 aa		13.9	□□□□□ -0.18
CERS3-208	ENST00000560944	YDJC	A8MPS7	323 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	RAB11FIP3	O75154	756 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	SLC5A1	P13866	664 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	IARS	P41252	1262 aa	Known RBP	13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	SCARF1	Q14162	830 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	SOGA3	Q5TF21	947 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	C9orf131	Q5VYM1	1079 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	CC2D2B	Q6DHV5	1058 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	PI16	Q6UXB8	463 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	FAM84B	Q96KN1	310 aa	Predicted RBP	13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	MXD3	Q9BW11	206 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	LEMD3	Q9Y2U8	911 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	ZNF541	Q9H0D2	1346 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	LTBP3	Q9NS15	1303 aa		13.89	□□□□□ -0.19
CERS3-208	ENST00000560944	DICER1	Q9UPY3	1922 aa	Known RBP	13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	ECE2	O60344	883 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	NUCB1	Q02818	461 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	KIAA2012	Q0VF49	1180 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	UBE4A	Q14139	1066 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	WASHC4	Q2M389	1173 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	ERC1	Q8IUD2	1116 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	LARGE2	Q8N3Y3	721 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	LPIN2	Q92539	896 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	TMX4	Q9H1E5	349 aa	Predicted RBP	13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	RNF181	Q9P0P0	153 aa		13.88	□□□□□ -0.19
CERS3-208	ENST00000560944	ADAMTSL1	Q8N6G6	1762 aa		13.87	□□□□□ -0.19
CERS3-208	ENST00000560944	HSP90AB4P	Q58FF6	505 aa		13.87	□□□□□ -0.19
CERS3-208	ENST00000560944	GCC1	Q96CN9	775 aa		13.87	□□□□□ -0.19
CERS3-208	ENST00000560944	MYH13	Q9UKX3	1938 aa		13.87	□□□□□ -0.19
CERS3-208	ENST00000560944	IFIT1	P09914	478 aa	Known RBP	13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	LMNB1	P20700	586 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	CHAF1A	Q13111	956 aa	Predicted RBP	13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	FBXO33	Q7Z6M2	555 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	CHD1L	Q86WJ1	897 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	FBXW7	Q969H0	707 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	GPR108	Q9NPR9	543 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	SNRK	Q9NRH2	765 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	SALL3	Q9BXA9	1300 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	AKAP11	Q9UKA4	1901 aa		13.86	□□□□□ -0.19
CERS3-208	ENST00000560944	RAD17	O75943	681 aa		13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	GRIK5	Q16478	980 aa		13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	CCDC102B	Q68D86	513 aa		13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	C15orf52	Q6ZUT6	534 aa	Known RBP	13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	CLASRP	Q8N2M8	674 aa	Known RBP	13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	EDC3	Q96F86	508 aa	Known RBP	13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	CD209	Q9NNX6	404 aa		13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	AKAP2	Q9Y2D5	859 aa		13.85	□□□□□ -0.19
CERS3-208	ENST00000560944	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	GRIN3B	O60391	1043 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	MAP4K4	O95819	1239 aa	Predicted RBP	13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	IFIT2	P09913	472 aa	Known RBP	13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	HIBADH	P31937	336 aa	Known RBP	13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	RASGRF1	Q13972	1273 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	NIM1K	Q8IY84	436 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	SUPT20H	Q8NEM7	779 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	EYA3	Q99504	573 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	PSME4	Q14997	1843 aa		13.84	□□□□□ -0.19
CERS3-208	ENST00000560944	SHTN1	A0MZ66	631 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	MCAM	P43121	646 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	TTC39A	Q5SRH9	613 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	GORAB	Q5T7V8	394 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	ERICH6B	Q5W0A0	696 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	ZNF804A	Q7Z570	1209 aa		13.83	□□□□□ -0.2
CERS3-208	ENST00000560944	PSMD14	O00487	310 aa		13.82	□□□□□ -0.2
CERS3-208	ENST00000560944	CHGB	P05060	677 aa		13.82	□□□□□ -0.2
CERS3-208	ENST00000560944	GTF2I	P78347	998 aa		13.82	□□□□□ -0.2
CERS3-208	ENST00000560944	VPS37D	Q86XT2	251 aa		13.82	□□□□□ -0.2
CERS3-208	ENST00000560944	CERS5	Q8N5B7	392 aa		13.82	□□□□□ -0.2
CERS3-208	ENST00000560944	TDRD7	Q8NHU6	1098 aa	Known RBP	13.82	□□□□□ -0.2
CERS3-208	ENST00000560944		G3V3G9	751 aa		13.81	□□□□□ -0.2
CERS3-208	ENST00000560944	IL1R1	P14778	569 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms