RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 NFKBIEO00221 500 aa8.79□□□□□ -1
HMG20A-211ENST00000560867 PTPRAP18433 802 aa8.79□□□□□ -1
HMG20A-211ENST00000560867 DGKGP49619 791 aa8.79□□□□□ -1
HMG20A-211ENST00000560867 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
HMG20A-211ENST00000560867 NEDD1Q8NHV4 660 aa8.79□□□□□ -1
HMG20A-211ENST00000560867 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
HMG20A-211ENST00000560867 SMG9Q9H0W8 520 aaKnown RBP8.79□□□□□ -1
HMG20A-211ENST00000560867 M0R082 166 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 PDE2AO00408 941 aaPredicted RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 ALBP02768 609 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 POLR3DP05423 398 aaPredicted RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 VAMP1P23763 118 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 DAB2P98082 770 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.78□□□□□ -1
HMG20A-211ENST00000560867 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 WHAMMQ8TF30 809 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 DUSP9Q99956 384 aaKnown RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 ADAM19Q9H013 955 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 EHD4Q9H223 541 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 RASSF4Q9H2L5 321 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 LIN7BQ9HAP6 207 aa8.78□□□□□ -1
HMG20A-211ENST00000560867 SRA1Q9HD15 236 aaKnown RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
HMG20A-211ENST00000560867 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 EPS8L3Q8TE67 593 aaKnown RBP8.77□□□□□ -1.01
HMG20A-211ENST00000560867 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 C12orf49Q9H741 205 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 FAM8A1Q9UBU6 413 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 PARP2Q9UGN5 583 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
HMG20A-211ENST00000560867 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
HMG20A-211ENST00000560867 ATP11AP98196 1134 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 PSMD2Q13200 908 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 GRM2Q14416 872 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 RPS26P11Q5JNZ5 115 aaPredicted RBP8.76□□□□□ -1.01
HMG20A-211ENST00000560867 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 MAP4K3Q8IVH8 894 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 TCF12Q99081 682 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 MRS2Q9HD23 443 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 PPM1HQ9ULR3 514 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
HMG20A-211ENST00000560867 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
HMG20A-211ENST00000560867 ITPKAP23677 461 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 GSTT1P30711 240 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 AFF1P51825 1210 aaKnown RBP8.75□□□□□ -1.01
HMG20A-211ENST00000560867 GRIK5Q16478 980 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 PODNQ7Z5L7 613 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 BSNDQ8WZ55 320 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 WNT8BQ93098 351 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 BCO2Q9BYV7 579 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 LATS2Q9NRM7 1088 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 MKL2Q9ULH7 1088 aa8.75□□□□□ -1.01
HMG20A-211ENST00000560867 SORBS3O60504 671 aa8.74□□□□□ -1.01
HMG20A-211ENST00000560867 HOXB4P17483 251 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-211ENST00000560867 IRS1P35568 1242 aa8.74□□□□□ -1.01
HMG20A-211ENST00000560867 GLIS3Q8NEA6 775 aa8.74□□□□□ -1.01
HMG20A-211ENST00000560867 POP1Q99575 1024 aaKnown RBP8.74□□□□□ -1.01
HMG20A-211ENST00000560867 ABCB6Q9NP58 842 aa8.74□□□□□ -1.01
HMG20A-211ENST00000560867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-211ENST00000560867 TMEM238LA0A1B0GVL6 79 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 GNB5O14775 395 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 NID1P14543 1247 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 CDC27P30260 824 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 CABP4P57796 275 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 NUDT8Q8WV74 236 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 FOXD4L4Q8WXT5 416 aaPredicted RBP8.73□□□□□ -1.01
HMG20A-211ENST00000560867 NOP53Q9NZM5 478 aaKnown RBP8.73□□□□□ -1.01
HMG20A-211ENST00000560867 SOX13Q9UN79 622 aa8.73□□□□□ -1.01
HMG20A-211ENST00000560867 ACPPP15309 386 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 MRPL58Q14197 206 aaKnown RBP8.72□□□□□ -1.01
HMG20A-211ENST00000560867 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 ALYREFQ86V81 257 aaKnown RBP8.72□□□□□ -1.01
HMG20A-211ENST00000560867 WFDC8Q8IUA0 241 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 BEND7Q8N7W2 519 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-211ENST00000560867 CRELD1Q96HD1 420 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 RRAGCQ9HB90 399 aa8.72□□□□□ -1.01
HMG20A-211ENST00000560867 A0A096LPE4 126 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 H3BRJ5 948 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 FAM117BQ6P1L5 589 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 PI16Q6UXB8 463 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 SCARF2Q96GP6 870 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-211ENST00000560867 OSBPL7Q9BZF2 842 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 SOX17Q9H6I2 414 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-211ENST00000560867 TRIM33Q9UPN9 1127 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 PPME1Q9Y570 386 aa8.71□□□□□ -1.02
HMG20A-211ENST00000560867 ST13P50502 369 aaKnown RBP8.7□□□□□ -1.02
HMG20A-211ENST00000560867 COL9A3Q14050 684 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-211ENST00000560867 NXPE4Q6UWF7 544 aa8.7□□□□□ -1.02
HMG20A-211ENST00000560867 CLEC4MQ9H2X3 399 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-211ENST00000560867 GRIA4P48058 902 aa8.69□□□□□ -1.02
HMG20A-211ENST00000560867 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms