RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
TSPAN3-209ENST00000560715 SPAG9O60271 1321 aaKnown RBP8.09□□□□□ -1.11
TSPAN3-209ENST00000560715 CCDC144AA2RUR9 1427 aa8.09□□□□□ -1.11
TSPAN3-209ENST00000560715 SCAPERQ9BY12 1400 aa8.09□□□□□ -1.11
TSPAN3-209ENST00000560715 RAB27AP51159 221 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 SQSTM1Q13501 440 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 TTC30BQ8N4P2 665 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 ZIM2Q9NZV7 527 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 DAAM1Q9Y4D1 1078 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 CD2APQ9Y5K6 639 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 CFAP74Q9C0B2 1584 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 KATNA1O75449 491 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 GNA15P30679 374 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 ZKSCAN5Q9Y2L8 839 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 ATP7AQ04656 1500 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 MYBBP1AQ9BQG0 1328 aaKnown RBP8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 EIF2AK4Q9P2K8 1649 aaKnown RBP8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 GCGRP47871 477 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 SEPT6Q14141 434 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 NOD1Q9Y239 953 aa8.08□□□□□ -1.12
TSPAN3-209ENST00000560715 PLA2R1Q13018 1463 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 USP47Q96K76 1375 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 A6NHS1 94 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 POLD1P28340 1107 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 CDC27P30260 824 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 MMP14P50281 582 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 TOMM20Q15388 145 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 SLC4A8Q2Y0W8 1093 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 NBPF1Q3BBV0 1214 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 SIX5Q8N196 739 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 NAP1L4Q99733 375 aaKnown RBP8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 PANK3Q9H999 370 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 ADGRL1O94910 1474 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 BCORL1Q5H9F3 1711 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 APPBP2Q92624 585 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 PDLIM2Q96JY6 352 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 ZHX3Q9H4I2 956 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 QTRT2Q9H974 415 aaKnown RBP8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 ENAMQ9NRM1 1142 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 FKBPLQ9UIM3 349 aa8.07□□□□□ -1.12
TSPAN3-209ENST00000560715 TRIM37O94972 964 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 POU3F3P20264 500 aaPredicted RBP8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 RRM1P23921 792 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 CLCN6P51797 869 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 SPG7Q9UQ90 795 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 E9PCH4 1651 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 OPLAHO14841 1288 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 LDHCP07864 332 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 NFE2Q16621 373 aaPredicted RBP8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 AFAP1Q8N556 730 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 PTCD2Q8WV60 388 aaKnown RBP8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 GBP4Q96PP9 640 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 AVENQ9NQS1 362 aaPredicted RBP8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 TPX2Q9ULW0 747 aaKnown RBP8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 INSRP06213 1382 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 LAMC1P11047 1609 aa8.06□□□□□ -1.12
TSPAN3-209ENST00000560715 TET3O43151 1660 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 DDIT3P35638 169 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 KCNJ4P48050 445 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 TIFAQ96CG3 184 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 FRMD6Q96NE9 622 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 APBA2Q99767 749 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 PFDN2Q9UHV9 154 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 TAGLN3Q9UI15 199 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 PRKAB1Q9Y478 270 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 SETD1BQ9UPS6 1966 aaKnown RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 SPHKAPQ2M3C7 1700 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 IFRD1O00458 451 aaPredicted RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 IRS4O14654 1257 aaPredicted RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 DNAJB2P25686 324 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 WEE1P30291 646 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 RAB33AQ14088 237 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 PUS10Q3MIT2 529 aaKnown RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 ZNF771Q7L3S4 317 aaPredicted RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 KIAA0907Q7Z7F0 614 aaPredicted RBP8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 LRRC27Q9C0I9 530 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 PRAG1Q86YV5 1406 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
TSPAN3-209ENST00000560715 EXOC5O00471 708 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 IRS1P35568 1242 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 TBCELQ5QJ74 424 aa8.04□□□□□ -1.12
TSPAN3-209ENST00000560715 DDX42Q86XP3 938 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms