RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 ZNF157P51786 506 aaPredicted RBP17.84■□□□□ 0.45
LDLR-213ENST00000560502 SCARF1Q14162 830 aa17.84■□□□□ 0.45
LDLR-213ENST00000560502 ANGEL2Q5VTE6 544 aaKnown RBP17.84■□□□□ 0.45
LDLR-213ENST00000560502 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
LDLR-213ENST00000560502 PI4KAP1Q8N8J0 262 aa17.84■□□□□ 0.45
LDLR-213ENST00000560502 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
LDLR-213ENST00000560502 CDC5LQ99459 802 aaKnown RBP17.84■□□□□ 0.45
LDLR-213ENST00000560502 SALL2Q9Y467 1007 aaPredicted RBP17.84■□□□□ 0.45
LDLR-213ENST00000560502 IL16Q14005 1332 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 USP17L3A6NCW0 530 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 USP17L4A6NCW7 530 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 WTIPA6NIX2 430 aaPredicted RBP17.83■□□□□ 0.44
LDLR-213ENST00000560502 USP17L8P0C7I0 530 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 DGKZQ13574 1117 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 USP17L1Q7RTZ2 530 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.44
LDLR-213ENST00000560502 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
LDLR-213ENST00000560502 GREM2Q9H772 168 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 MYOZ2Q9NPC6 264 aa17.83■□□□□ 0.44
LDLR-213ENST00000560502 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
LDLR-213ENST00000560502 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
LDLR-213ENST00000560502 MLLT1Q03111 559 aaPredicted RBP17.82■□□□□ 0.44
LDLR-213ENST00000560502 RASAL3Q86YV0 1011 aa17.82■□□□□ 0.44
LDLR-213ENST00000560502 MINPP1Q9UNW1 487 aa17.82■□□□□ 0.44
LDLR-213ENST00000560502 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
LDLR-213ENST00000560502 FKBP1BP68106 108 aa17.81■□□□□ 0.44
LDLR-213ENST00000560502 CWF19L2Q2TBE0 894 aaKnown RBP17.81■□□□□ 0.44
LDLR-213ENST00000560502 DACT2Q5SW24 774 aa17.81■□□□□ 0.44
LDLR-213ENST00000560502 G2E3Q7L622 706 aa17.81■□□□□ 0.44
LDLR-213ENST00000560502 RNF186Q9NXI6 227 aa17.81■□□□□ 0.44
LDLR-213ENST00000560502 H7C1W4 665 aa17.8■□□□□ 0.44
LDLR-213ENST00000560502 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
LDLR-213ENST00000560502 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
LDLR-213ENST00000560502 CSRNP1Q96S65 589 aa17.8■□□□□ 0.44
LDLR-213ENST00000560502 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
LDLR-213ENST00000560502 TRPA1O75762 1119 aa17.79■□□□□ 0.44
LDLR-213ENST00000560502 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
LDLR-213ENST00000560502 CDCA7LQ96GN5 454 aa17.79■□□□□ 0.44
LDLR-213ENST00000560502 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
LDLR-213ENST00000560502 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
LDLR-213ENST00000560502 CASP7P55210 303 aa17.78■□□□□ 0.44
LDLR-213ENST00000560502 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
LDLR-213ENST00000560502 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
LDLR-213ENST00000560502 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
LDLR-213ENST00000560502 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
LDLR-213ENST00000560502 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
LDLR-213ENST00000560502 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
LDLR-213ENST00000560502 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 NBPF9Q3BBW0 867 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 RCAN3Q9UKA8 241 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
LDLR-213ENST00000560502 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
LDLR-213ENST00000560502 GCKRQ14397 625 aa17.76■□□□□ 0.43
LDLR-213ENST00000560502 MOB2Q70IA6 237 aa17.76■□□□□ 0.43
LDLR-213ENST00000560502 SCAF8Q9UPN6 1271 aaKnown RBP17.76■□□□□ 0.43
LDLR-213ENST00000560502 ECM29Q5VYK3 1845 aa17.76■□□□□ 0.43
LDLR-213ENST00000560502 WNT10BO00744 389 aa17.75■□□□□ 0.43
LDLR-213ENST00000560502 SLC34A2O95436 690 aa17.75■□□□□ 0.43
LDLR-213ENST00000560502 CSF1RP07333 972 aa17.75■□□□□ 0.43
LDLR-213ENST00000560502 KLRK1P26718 216 aa17.75■□□□□ 0.43
LDLR-213ENST00000560502 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
LDLR-213ENST00000560502 FLIIQ13045 1269 aa17.75■□□□□ 0.43
LDLR-213ENST00000560502 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
LDLR-213ENST00000560502 ITGA6P23229 1130 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 MMP14P50281 582 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 OGFOD1Q8N543 542 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 LAMB1P07942 1786 aa17.74■□□□□ 0.43
LDLR-213ENST00000560502 IRS2Q9Y4H2 1338 aa17.73■□□□□ 0.43
LDLR-213ENST00000560502 UBE2Q2LH0YL09 131 aa17.73■□□□□ 0.43
LDLR-213ENST00000560502 PRAMEF18Q5VWM3 479 aa17.73■□□□□ 0.43
LDLR-213ENST00000560502 ZBED3Q96IU2 234 aaPredicted RBP17.73■□□□□ 0.43
LDLR-213ENST00000560502 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
LDLR-213ENST00000560502 TNRC18O15417 2968 aaPredicted RBP17.72■□□□□ 0.43
LDLR-213ENST00000560502 SASH1O94885 1247 aa17.72■□□□□ 0.43
LDLR-213ENST00000560502 CTU1Q7Z7A3 348 aaKnown RBP17.72■□□□□ 0.43
LDLR-213ENST00000560502 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
LDLR-213ENST00000560502 DNAAF4Q8WXU2 420 aa17.72■□□□□ 0.43
LDLR-213ENST00000560502 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
LDLR-213ENST00000560502 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
LDLR-213ENST00000560502 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
LDLR-213ENST00000560502 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
LDLR-213ENST00000560502 CHRNDQ07001 517 aa17.7■□□□□ 0.42
LDLR-213ENST00000560502 MPHOSPH8Q99549 860 aa17.7■□□□□ 0.42
LDLR-213ENST00000560502 VAMP4O75379 141 aa17.69■□□□□ 0.42
LDLR-213ENST00000560502 NF2P35240 595 aa17.69■□□□□ 0.42
LDLR-213ENST00000560502 TM4SF4P48230 202 aa17.69■□□□□ 0.42
LDLR-213ENST00000560502 GTF2IP78347 998 aa17.69■□□□□ 0.42
LDLR-213ENST00000560502 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
LDLR-213ENST00000560502 APOBEC3FQ8IUX4 373 aaKnown RBP17.69■□□□□ 0.42
LDLR-213ENST00000560502 KIAA0825Q8IV33 1275 aa17.69■□□□□ 0.42
LDLR-213ENST00000560502 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
LDLR-213ENST00000560502 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
LDLR-213ENST00000560502 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
LDLR-213ENST00000560502 FOXO4P98177 505 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms