RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CHMLP26374 656 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 ARID4AP29374 1257 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-209ENST00000560463 ADORA1P30542 326 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
TRAF3-209ENST00000560463 HELBQ8NG08 1087 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-209ENST00000560463 LEMD3Q9Y2U8 911 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 C10orf71Q711Q0 1435 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 REC8O95072 547 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 SEC24BO95487 1268 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
TRAF3-209ENST00000560463 CAVIN4Q5BKX8 364 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 CCDC102BQ68D86 513 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 STYK1Q6J9G0 422 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 SP8Q8IXZ3 490 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 RUFY2Q8WXA3 655 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 MTFR1LQ9H019 292 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 PAG1Q9NWQ8 432 aa10.44□□□□□ -0.74
TRAF3-209ENST00000560463 ZNF646O15015 1829 aaPredicted RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 ECM29Q5VYK3 1845 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 KCNJ4P48050 445 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 TTF1Q15361 905 aaPredicted RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 KBTBD3Q8NAB2 608 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 DNAJC2Q99543 621 aaKnown RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 ESYT1Q9BSJ8 1104 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 FSD1Q9BTV5 496 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 PDGFDQ9GZP0 370 aaPredicted RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
TRAF3-209ENST00000560463 DICER1Q9UPY3 1922 aaKnown RBP10.43□□□□□ -0.74
TRAF3-209ENST00000560463 FOCADQ5VW36 1801 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 RAD50Q92878 1312 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 PPEF1O14829 653 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-209ENST00000560463 SEMA3EO15041 775 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 ATP2B4P23634 1241 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 POLD1P28340 1107 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 MCAMP43121 646 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 MFAP1P55081 439 aaKnown RBP10.42□□□□□ -0.74
TRAF3-209ENST00000560463 C15orf52Q6ZUT6 534 aaKnown RBP10.42□□□□□ -0.74
TRAF3-209ENST00000560463 C2CD5Q86YS7 1000 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 TMX4Q9H1E5 349 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-209ENST00000560463 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 ATP6V0A2Q9Y487 856 aa10.42□□□□□ -0.74
TRAF3-209ENST00000560463 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
TRAF3-209ENST00000560463 PDS5AQ29RF7 1337 aaKnown RBP10.41□□□□□ -0.74
TRAF3-209ENST00000560463 GOLIM4O00461 696 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 SGSM2O43147 1006 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 IGSF3O75054 1194 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
TRAF3-209ENST00000560463 PHKA1P46020 1223 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRAF3-209ENST00000560463 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 ZSCAN25Q6NSZ9 544 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 VPS37DQ86XT2 251 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 TBC1D32Q96NH3 1257 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 C22orf23Q9BZE7 217 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 MYH8P13535 1937 aa10.41□□□□□ -0.74
TRAF3-209ENST00000560463 IRS2Q9Y4H2 1338 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 SNAP23O00161 211 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 ANP32AP39687 249 aaKnown RBP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 RBM25P49756 843 aaKnown RBP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 BCAMP50895 628 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 R3HDM1Q15032 1099 aaKnown RBP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 SPATA5Q8NB90 893 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 ZNF622Q969S3 477 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 USP26Q9BXU7 913 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 SNRKQ9NRH2 765 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 HMG20BQ9P0W2 317 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 DENND2AQ9ULE3 1009 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
TRAF3-209ENST00000560463 MYH1P12882 1939 aa10.4□□□□□ -0.74
TRAF3-209ENST00000560463 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 SCN9AQ15858 1988 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 SBF1O95248 1867 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 CYP2E1P05181 493 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-209ENST00000560463 HIBADHP31937 336 aaKnown RBP10.39□□□□□ -0.75
TRAF3-209ENST00000560463 ZAP70P43403 619 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 TGFB2P61812 414 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 GPSM2P81274 684 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 SCARF1Q14162 830 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 TMED8Q6PL24 325 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-209ENST00000560463 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
TRAF3-209ENST00000560463 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 EDC3Q96F86 508 aaKnown RBP10.39□□□□□ -0.75
TRAF3-209ENST00000560463 HELLSQ9NRZ9 838 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 NDUFB9Q9Y6M9 179 aa10.39□□□□□ -0.75
TRAF3-209ENST00000560463 RNF113AO15541 343 aaKnown RBP10.38□□□□□ -0.75
TRAF3-209ENST00000560463 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
TRAF3-209ENST00000560463 GYG1P46976 350 aa10.38□□□□□ -0.75
TRAF3-209ENST00000560463 NMIQ13287 307 aaPredicted RBP10.38□□□□□ -0.75
TRAF3-209ENST00000560463 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
TRAF3-209ENST00000560463 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms