RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 TFCP2Q12800 502 aa20.21■□□□□ 0.83
LRRC28-217ENST00000560213 PODNQ7Z5L7 613 aa20.21■□□□□ 0.83
LRRC28-217ENST00000560213 COA1Q9GZY4 146 aa20.21■□□□□ 0.83
LRRC28-217ENST00000560213 ZNF541Q9H0D2 1346 aa20.21■□□□□ 0.83
LRRC28-217ENST00000560213 YDJCA8MPS7 323 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 RAD17O75943 681 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
LRRC28-217ENST00000560213 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
LRRC28-217ENST00000560213 SLC5A1P13866 664 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 CXCL9Q07325 125 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 AAMPQ13685 434 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 CIAPIN1Q6FI81 312 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 ZNF804AQ7Z570 1209 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 LPIN2Q92539 896 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 GJA3Q9Y6H8 435 aa20.2■□□□□ 0.82
LRRC28-217ENST00000560213 FGFR2P21802 821 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 TNIP1Q15025 636 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 ATP2B3Q16720 1220 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 UTRNP46939 3433 aa20.19■□□□□ 0.82
LRRC28-217ENST00000560213 SASH1O94885 1247 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
LRRC28-217ENST00000560213 GYG1P46976 350 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
LRRC28-217ENST00000560213 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 VPS37DQ86XT2 251 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 GPC2Q8N158 579 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 ZNF784Q8NCA9 323 aaPredicted RBP20.18■□□□□ 0.82
LRRC28-217ENST00000560213 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
LRRC28-217ENST00000560213 CD209Q9NNX6 404 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 KCNQ5Q9NR82 932 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 PCDHB15Q9Y5E8 787 aa20.18■□□□□ 0.82
LRRC28-217ENST00000560213 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
LRRC28-217ENST00000560213 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
LRRC28-217ENST00000560213 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 PSMD14O00487 310 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 TIMM10P62072 90 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 FBXO33Q7Z6M2 555 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 NEUROD6Q96NK8 337 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 SCN9AQ15858 1988 aa20.15■□□□□ 0.82
LRRC28-217ENST00000560213 A0A1B0GUL7 405 aa20.14■□□□□ 0.81
LRRC28-217ENST00000560213 IL1R1P14778 569 aa20.14■□□□□ 0.81
LRRC28-217ENST00000560213 BCAMP50895 628 aa20.14■□□□□ 0.81
LRRC28-217ENST00000560213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.14■□□□□ 0.81
LRRC28-217ENST00000560213 APBB1O00213 710 aa20.13■□□□□ 0.81
LRRC28-217ENST00000560213 RAB11FIP3O75154 756 aa20.13■□□□□ 0.81
LRRC28-217ENST00000560213 FRAT2O75474 233 aaPredicted RBP20.13■□□□□ 0.81
LRRC28-217ENST00000560213 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
LRRC28-217ENST00000560213 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
LRRC28-217ENST00000560213 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
LRRC28-217ENST00000560213 L3MBTL3Q96JM7 780 aaPredicted RBP20.13■□□□□ 0.81
LRRC28-217ENST00000560213 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
LRRC28-217ENST00000560213 GPR108Q9NPR9 543 aa20.13■□□□□ 0.81
LRRC28-217ENST00000560213 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
LRRC28-217ENST00000560213 GTF2IP78347 998 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 TNNI3KQ59H18 835 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 KIF1BPQ96EK5 621 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 XAGE2Q96GT9 111 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
LRRC28-217ENST00000560213 FPGT-TNNI3KV9GXZ4 949 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
LRRC28-217ENST00000560213 PSME4Q14997 1843 aa20.11■□□□□ 0.81
LRRC28-217ENST00000560213 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
LRRC28-217ENST00000560213 LMOD1P29536 600 aaPredicted RBP20.11■□□□□ 0.81
LRRC28-217ENST00000560213 ADORA1P30542 326 aa20.11■□□□□ 0.81
LRRC28-217ENST00000560213 GMPSP49915 693 aaPredicted RBP20.11■□□□□ 0.81
LRRC28-217ENST00000560213 GORABQ5T7V8 394 aa20.11■□□□□ 0.81
LRRC28-217ENST00000560213 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
LRRC28-217ENST00000560213 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
LRRC28-217ENST00000560213 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
LRRC28-217ENST00000560213 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
LRRC28-217ENST00000560213 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
LRRC28-217ENST00000560213 ZNF609O15014 1411 aa20.1■□□□□ 0.81
LRRC28-217ENST00000560213 POTECB2RU33 542 aa20.09■□□□□ 0.81
LRRC28-217ENST00000560213 RPS12P25398 132 aaKnown RBP20.09■□□□□ 0.81
LRRC28-217ENST00000560213 DACT2Q5SW24 774 aa20.09■□□□□ 0.81
LRRC28-217ENST00000560213 AGBL3Q8NEM8 1001 aa20.09■□□□□ 0.81
LRRC28-217ENST00000560213 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
LRRC28-217ENST00000560213 SCN4AP35499 1836 aa20.09■□□□□ 0.81
LRRC28-217ENST00000560213 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 PHKA1P46020 1223 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 SCNN1DP51172 638 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 CCDC102BQ68D86 513 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.81
LRRC28-217ENST00000560213 DPF2Q92785 391 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 EAF2Q96CJ1 260 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-217ENST00000560213 CCDC8Q9H0W5 538 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-217ENST00000560213 BCL11AQ9H165 835 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 GPRC5DQ9NZD1 345 aa20.08■□□□□ 0.81
LRRC28-217ENST00000560213 CNOT7Q9UIV1 285 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms