RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
HERC1-205ENST00000559886 CNKSR1Q969H4 720 aa14.84□□□□□ -0.03
HERC1-205ENST00000559886 ARID4AP29374 1257 aaPredicted RBP14.83□□□□□ -0.04
HERC1-205ENST00000559886 PHKA1P46020 1223 aa14.83□□□□□ -0.04
HERC1-205ENST00000559886 GPSM2P81274 684 aa14.83□□□□□ -0.04
HERC1-205ENST00000559886 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
HERC1-205ENST00000559886 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
HERC1-205ENST00000559886 PTGER2P43116 358 aa14.83□□□□□ -0.04
HERC1-205ENST00000559886 NSFL1CQ9UNZ2 370 aaKnown RBP14.82□□□□□ -0.04
HERC1-205ENST00000559886 IRS2Q9Y4H2 1338 aa14.82□□□□□ -0.04
HERC1-205ENST00000559886 BCAMP50895 628 aa14.82□□□□□ -0.04
HERC1-205ENST00000559886 SCARF1Q14162 830 aa14.82□□□□□ -0.04
HERC1-205ENST00000559886 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
HERC1-205ENST00000559886 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
HERC1-205ENST00000559886 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
HERC1-205ENST00000559886 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 MCAMP43121 646 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 TGFB2P61812 414 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 EDC3Q96F86 508 aaKnown RBP14.81□□□□□ -0.04
HERC1-205ENST00000559886 FAM84BQ96KN1 310 aaPredicted RBP14.81□□□□□ -0.04
HERC1-205ENST00000559886 NDUFB9Q9Y6M9 179 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 MYH13Q9UKX3 1938 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 SEC24BO95487 1268 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 KCNA3P22001 575 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 KLRK1P26718 216 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 CAVIN4Q5BKX8 364 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 CASC1Q6TDU7 716 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 C15orf52Q6ZUT6 534 aaKnown RBP14.81□□□□□ -0.04
HERC1-205ENST00000559886 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 PAG1Q9NWQ8 432 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
HERC1-205ENST00000559886 DPEP1P16444 411 aa14.8□□□□□ -0.04
HERC1-205ENST00000559886 CHMLP26374 656 aa14.8□□□□□ -0.04
HERC1-205ENST00000559886 BRCA1P38398 1863 aaKnown RBP14.8□□□□□ -0.04
HERC1-205ENST00000559886 GYG1P46976 350 aa14.8□□□□□ -0.04
HERC1-205ENST00000559886 A0A0G2JLW4 131 aa14.8□□□□□ -0.04
HERC1-205ENST00000559886 UFL1O94874 794 aa14.8□□□□□ -0.04
HERC1-205ENST00000559886 TMX4Q9H1E5 349 aaPredicted RBP14.8□□□□□ -0.04
HERC1-205ENST00000559886 MYH7P12883 1935 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 MYO5AQ9Y4I1 1855 aaKnown RBP14.79□□□□□ -0.04
HERC1-205ENST00000559886 GOLIM4O00461 696 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 FKBP4Q02790 459 aaKnown RBP eCLIP14.79□□□□□ -0.04
HERC1-205ENST00000559886 OLFM4Q6UX06 510 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 TXNRD3Q86VQ6 643 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 TBC1D16Q8TBP0 767 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 C7orf43Q8WVR3 580 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 POLLQ9UGP5 575 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 CD2APQ9Y5K6 639 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 DUOX1Q9NRD9 1551 aa14.79□□□□□ -0.04
HERC1-205ENST00000559886 ZBTB22O15209 634 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 ZAP70P43403 619 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 RASGRF1Q13972 1273 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 PI16Q6UXB8 463 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 MPNDQ8N594 471 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 TTLL6Q8N841 843 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 KBTBD3Q8NAB2 608 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 GNL3LQ9NVN8 582 aaKnown RBP14.78□□□□□ -0.04
HERC1-205ENST00000559886 HMG20BQ9P0W2 317 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
HERC1-205ENST00000559886 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 SPATA5Q8NB90 893 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 SPON1Q9HCB6 807 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 RFX7Q2KHR2 1363 aa14.78□□□□□ -0.04
HERC1-205ENST00000559886 ANTXR1Q9H6X2 564 aa14.77□□□□□ -0.04
HERC1-205ENST00000559886 DOCK2Q92608 1830 aa14.77□□□□□ -0.04
HERC1-205ENST00000559886 HIP1O00291 1037 aa14.77□□□□□ -0.05
HERC1-205ENST00000559886 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
HERC1-205ENST00000559886 DPP8Q6V1X1 898 aaPredicted RBP14.77□□□□□ -0.05
HERC1-205ENST00000559886 MED23Q9ULK4 1368 aa14.77□□□□□ -0.05
HERC1-205ENST00000559886 SEMA3EO15041 775 aa14.76□□□□□ -0.05
HERC1-205ENST00000559886 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
HERC1-205ENST00000559886 CYP2E1P05181 493 aaPredicted RBP14.76□□□□□ -0.05
HERC1-205ENST00000559886 SNED1Q8TER0 1413 aa14.76□□□□□ -0.05
HERC1-205ENST00000559886 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
HERC1-205ENST00000559886 TTF1Q15361 905 aaPredicted RBP14.76□□□□□ -0.05
HERC1-205ENST00000559886 GPR101Q96P66 508 aaPredicted RBP14.76□□□□□ -0.05
HERC1-205ENST00000559886 ESYT1Q9BSJ8 1104 aa14.76□□□□□ -0.05
HERC1-205ENST00000559886 DIAPH3Q9NSV4 1193 aa14.76□□□□□ -0.05
HERC1-205ENST00000559886 PIM2Q9P1W9 311 aa14.75□□□□□ -0.05
HERC1-205ENST00000559886 DENND2AQ9ULE3 1009 aa14.75□□□□□ -0.05
HERC1-205ENST00000559886 IQSEC3Q9UPP2 1182 aaPredicted RBP14.75□□□□□ -0.05
HERC1-205ENST00000559886 PDS5AQ29RF7 1337 aaKnown RBP14.75□□□□□ -0.05
HERC1-205ENST00000559886 ZNF804AQ7Z570 1209 aa14.75□□□□□ -0.05
HERC1-205ENST00000559886 PPP1R1BQ9UD71 204 aaPredicted RBP14.75□□□□□ -0.05
HERC1-205ENST00000559886 COL1A1P02452 1464 aaPredicted RBP14.75□□□□□ -0.05
HERC1-205ENST00000559886 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
HERC1-205ENST00000559886 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 ZNF219Q9P2Y4 722 aaPredicted RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 GOLGB1Q14789 3259 aaKnown RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 C21orf2O43822 256 aa14.74□□□□□ -0.05
HERC1-205ENST00000559886 CWC27Q6UX04 472 aaKnown RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 TDRD7Q8NHU6 1098 aaKnown RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
HERC1-205ENST00000559886 PIH1D3Q9NQM4 214 aaKnown RBP14.74□□□□□ -0.05
HERC1-205ENST00000559886 SGSM2O43147 1006 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms