RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MYH3P11055 1940 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 XDHP47989 1333 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 CENPBP07199 599 aaPredicted RBP11.25□□□□□ -0.61
HMG20A-209ENST00000559728 ATP2B4P23634 1241 aa11.25□□□□□ -0.61
HMG20A-209ENST00000559728 TAF7LQ5H9L4 462 aa11.25□□□□□ -0.61
HMG20A-209ENST00000559728 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
HMG20A-209ENST00000559728 MROH5Q6ZUA9 1318 aa11.25□□□□□ -0.61
HMG20A-209ENST00000559728 PDE8BO95263 885 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 PYGBP11216 843 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
HMG20A-209ENST00000559728 IARSP41252 1262 aaKnown RBP11.24□□□□□ -0.61
HMG20A-209ENST00000559728 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 AOC3Q16853 763 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
HMG20A-209ENST00000559728 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 EXOC6BQ9Y2D4 811 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 LEMD3Q9Y2U8 911 aa11.24□□□□□ -0.61
HMG20A-209ENST00000559728 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
HMG20A-209ENST00000559728 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
HMG20A-209ENST00000559728 UFL1O94874 794 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 LMNB1P20700 586 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 TFCP2Q12800 502 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
HMG20A-209ENST00000559728 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 FZD9O00144 591 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 IGHDP01880 384 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
HMG20A-209ENST00000559728 AAMPQ13685 434 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 CACNA1SQ13698 1873 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
HMG20A-209ENST00000559728 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 PPIP5K2O43314 1243 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 FAM84BQ96KN1 310 aaPredicted RBP11.21□□□□□ -0.61
HMG20A-209ENST00000559728 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 RNF181Q9P0P0 153 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
HMG20A-209ENST00000559728 ZNF541Q9H0D2 1346 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 HMMRO75330 724 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 ADORA1P30542 326 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 TIMM10P62072 90 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMG20A-209ENST00000559728 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
HMG20A-209ENST00000559728 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 FBXO33Q7Z6M2 555 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 RHPN1Q8TCX5 695 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 EAF2Q96CJ1 260 aaPredicted RBP11.2□□□□□ -0.62
HMG20A-209ENST00000559728 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
HMG20A-209ENST00000559728 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
HMG20A-209ENST00000559728 ZNF609O15014 1411 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 GYG1P46976 350 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 BCAMP50895 628 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 LPIN2Q92539 896 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 EYA3Q99504 573 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 ZC3H12CQ9C0D7 883 aaKnown RBP11.19□□□□□ -0.62
HMG20A-209ENST00000559728 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 CD209Q9NNX6 404 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
HMG20A-209ENST00000559728 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
HMG20A-209ENST00000559728 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 ECE2O60344 883 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 IL1R1P14778 569 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 CXCL9Q07325 125 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 ZNRF3Q9ULT6 936 aa11.18□□□□□ -0.62
HMG20A-209ENST00000559728 SMARCA5O60264 1052 aaPredicted RBP11.17□□□□□ -0.62
HMG20A-209ENST00000559728 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
HMG20A-209ENST00000559728 KCNJ4P48050 445 aa11.17□□□□□ -0.62
HMG20A-209ENST00000559728 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
HMG20A-209ENST00000559728 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
HMG20A-209ENST00000559728 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
HMG20A-209ENST00000559728 DBNLQ9UJU6 430 aaKnown RBP11.17□□□□□ -0.62
HMG20A-209ENST00000559728 COL1A1P02452 1464 aaPredicted RBP11.17□□□□□ -0.62
HMG20A-209ENST00000559728 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
HMG20A-209ENST00000559728 POTECB2RU33 542 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 APBB1O00213 710 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
HMG20A-209ENST00000559728 HIBADHP31937 336 aaKnown RBP11.16□□□□□ -0.62
HMG20A-209ENST00000559728 PHKA1P46020 1223 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
HMG20A-209ENST00000559728 HSP90AB4PQ58FF6 505 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
HMG20A-209ENST00000559728 ERC1Q8IUD2 1116 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms