RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 PODNQ7Z5L7 613 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
HERC1-204ENST00000559715 MXD3Q9BW11 206 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 BSDC1Q9NW68 430 aaPredicted RBP14.32□□□□□ -0.12
HERC1-204ENST00000559715 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
HERC1-204ENST00000559715 USP17L3A6NCW0 530 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 USP17L4A6NCW7 530 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 NEURL1BA8MQ27 555 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 USP17L8P0C7I0 530 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 HSP90B1P14625 803 aaKnown RBP14.31□□□□□ -0.12
HERC1-204ENST00000559715 ATP2B4P23634 1241 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 DGKZQ13574 1117 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 NBPF9Q3BBW0 867 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 MOB2Q70IA6 237 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 USP17L1Q7RTZ2 530 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 RASAL3Q86YV0 1011 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 IRS2Q9Y4H2 1338 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 MED23Q9ULK4 1368 aa14.31□□□□□ -0.12
HERC1-204ENST00000559715 TRPA1O75762 1119 aa14.3□□□□□ -0.12
HERC1-204ENST00000559715 SLC34A2O95436 690 aa14.3□□□□□ -0.12
HERC1-204ENST00000559715 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
HERC1-204ENST00000559715 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
HERC1-204ENST00000559715 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
HERC1-204ENST00000559715 KLRK1P26718 216 aa14.29□□□□□ -0.12
HERC1-204ENST00000559715 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
HERC1-204ENST00000559715 CCT4P50991 539 aaKnown RBP14.29□□□□□ -0.12
HERC1-204ENST00000559715 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
HERC1-204ENST00000559715 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
HERC1-204ENST00000559715 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
HERC1-204ENST00000559715 ZBED3Q96IU2 234 aaPredicted RBP14.29□□□□□ -0.12
HERC1-204ENST00000559715 PLA2G12BQ9BX93 195 aa14.29□□□□□ -0.12
HERC1-204ENST00000559715 WNT10BO00744 389 aa14.28□□□□□ -0.12
HERC1-204ENST00000559715 CSF1RP07333 972 aa14.28□□□□□ -0.12
HERC1-204ENST00000559715 LAMB1P07942 1786 aa14.28□□□□□ -0.12
HERC1-204ENST00000559715 CDC5LQ99459 802 aaKnown RBP14.28□□□□□ -0.12
HERC1-204ENST00000559715 FKBP1BP68106 108 aa14.27□□□□□ -0.13
HERC1-204ENST00000559715 GCKRQ14397 625 aa14.27□□□□□ -0.13
HERC1-204ENST00000559715 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
HERC1-204ENST00000559715 G3V3G9 751 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 UBE2Q2LH0YL09 131 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 SNAP23O00161 211 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
HERC1-204ENST00000559715 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 STRIP1Q5VSL9 837 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 ECM29Q5VYK3 1845 aa14.26□□□□□ -0.13
HERC1-204ENST00000559715 COA1Q9GZY4 146 aa14.25□□□□□ -0.13
HERC1-204ENST00000559715 LEMD3Q9Y2U8 911 aa14.25□□□□□ -0.13
HERC1-204ENST00000559715 IL16Q14005 1332 aa14.24□□□□□ -0.13
HERC1-204ENST00000559715 ITGA6P23229 1130 aa14.24□□□□□ -0.13
HERC1-204ENST00000559715 TM4SF4P48230 202 aa14.24□□□□□ -0.13
HERC1-204ENST00000559715 CERS5Q8N5B7 392 aa14.24□□□□□ -0.13
HERC1-204ENST00000559715 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
HERC1-204ENST00000559715 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 VAMP4O75379 141 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 FOXO4P98177 505 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 FLIIQ13045 1269 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 LDLRAD1Q5T700 205 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
HERC1-204ENST00000559715 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
HERC1-204ENST00000559715 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 AOX1Q06278 1338 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 SASH1O94885 1247 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
HERC1-204ENST00000559715 PTPN12Q05209 780 aaKnown RBP14.22□□□□□ -0.13
HERC1-204ENST00000559715 NEXNQ0ZGT2 675 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 TTLL5Q6EMB2 1281 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 C15orf52Q6ZUT6 534 aaKnown RBP14.22□□□□□ -0.13
HERC1-204ENST00000559715 CTU1Q7Z7A3 348 aaKnown RBP14.22□□□□□ -0.13
HERC1-204ENST00000559715 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 PCDHAC2Q9Y5I4 1007 aa14.22□□□□□ -0.13
HERC1-204ENST00000559715 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 FANCIQ9NVI1 1328 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 TBC1D8O95759 1140 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 CHRNDQ07001 517 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 EPHA10Q5JZY3 1008 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 DNAAF4Q8WXU2 420 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 CD209Q9NNX6 404 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.13
HERC1-204ENST00000559715 FZD1Q9UP38 647 aa14.21□□□□□ -0.13
HERC1-204ENST00000559715 MMP14P50281 582 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 SOX10P56693 466 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 GTF2IP78347 998 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
HERC1-204ENST00000559715 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 MTMR14Q8NCE2 650 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 ZNF296Q8WUU4 475 aaPredicted RBP14.2□□□□□ -0.14
HERC1-204ENST00000559715 CFHR5Q9BXR6 569 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 ANKRD2Q9GZV1 360 aa14.2□□□□□ -0.14
HERC1-204ENST00000559715 TAF5LO75529 589 aa14.19□□□□□ -0.14
HERC1-204ENST00000559715 IGHMBP2P38935 993 aaKnown RBP14.19□□□□□ -0.14
HERC1-204ENST00000559715 BEND3Q5T5X7 828 aa14.19□□□□□ -0.14
HERC1-204ENST00000559715 HELBQ8NG08 1087 aaPredicted RBP14.19□□□□□ -0.14
HERC1-204ENST00000559715 HPS5Q9UPZ3 1129 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms