RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CCDC96Q2M329 555 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 ERVV-1B6SEH8 477 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 GPR162Q16538 588 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 CCDC73Q6ZRK6 1079 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 SSH2Q76I76 1423 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 RNF113AO15541 343 aaKnown RBP12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 LRRC24Q50LG9 513 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 TCEANC2Q96MN5 208 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 KDM2BQ8NHM5 1336 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
CARMIL3-202ENST00000559694 BECN2A8MW95 431 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 PPIP5K2O43314 1243 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 CNKSR1Q969H4 720 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 FIBPO43427 364 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 TMEM67Q5HYA8 995 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 BARGINQ6ZT62 677 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.42
CARMIL3-202ENST00000559694 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 NCOA7Q8NI08 942 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 CCDC196A0A1B0GTZ2 297 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 STK38Q15208 465 aa12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
CARMIL3-202ENST00000559694 CCDC144CPQ8IYA2 1237 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 PLCG2P16885 1265 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 GYG1P46976 350 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 VAT1LQ9HCJ6 419 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 GTF2IP78347 998 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
CARMIL3-202ENST00000559694 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 MBD4O95243 580 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 SSFA2P28290 1259 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 ZAP70P43403 619 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 SEC24BO95487 1268 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 CHRNDQ07001 517 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 GRM1Q13255 1194 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 GOLGA8AA7E2F4 631 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 SEC63Q9UGP8 760 aaKnown RBP12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 LIMCH1Q9UPQ0 1083 aa12.43□□□□□ -0.42
CARMIL3-202ENST00000559694 SYCE3A1L190 88 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 CHMLP26374 656 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 BCAMP50895 628 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 ESR2Q92731 530 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 KAT14Q9H8E8 782 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 MCM5P33992 734 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 BRF1Q92994 677 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 CPDO75976 1380 aa12.42□□□□□ -0.42
CARMIL3-202ENST00000559694 GUCY1B3Q02153 619 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 SPATA5Q8NB90 893 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms