RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HCN4Q9Y3Q4 1203 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
ZEB1-216ENST00000559496 EIF3AQ14152 1382 aaKnown RBP9.54□□□□□ -0.88
ZEB1-216ENST00000559496 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 EFSO43281 561 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 C21orf2O43822 256 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 PPP1R12BO60237 982 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-216ENST00000559496 HOXB4P17483 251 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-216ENST00000559496 AVENQ9NQS1 362 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-216ENST00000559496 PTPRMP28827 1452 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 WASHC2AQ641Q2 1341 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-216ENST00000559496 ADGRB1O14514 1584 aa9.53□□□□□ -0.88
ZEB1-216ENST00000559496 CEP170BQ9Y4F5 1589 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-216ENST00000559496 DPYDQ12882 1025 aa9.52□□□□□ -0.88
ZEB1-216ENST00000559496 DCAF5Q96JK2 942 aa9.52□□□□□ -0.88
ZEB1-216ENST00000559496 HINFPQ9BQA5 517 aa9.52□□□□□ -0.88
ZEB1-216ENST00000559496 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.88
ZEB1-216ENST00000559496 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.88
ZEB1-216ENST00000559496 SETD1BQ9UPS6 1966 aaKnown RBP9.52□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L21D6R901 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 IGHA1P01876 353 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 EPXP11678 715 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
ZEB1-216ENST00000559496 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 THEMISQ8N1K5 641 aaPredicted RBP9.51□□□□□ -0.89
ZEB1-216ENST00000559496 SCG3Q8WXD2 468 aaKnown RBP9.51□□□□□ -0.89
ZEB1-216ENST00000559496 C2orf49Q9BVC5 232 aaPredicted RBP9.51□□□□□ -0.89
ZEB1-216ENST00000559496 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 PRR12Q9ULL5 1215 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 KIF7Q2M1P5 1343 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
ZEB1-216ENST00000559496 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
ZEB1-216ENST00000559496 SLIT1O75093 1534 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 ADH6P28332 368 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 KLF15Q9UIH9 416 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 ITGB2P05107 769 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 TESK2Q96S53 571 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 EID1Q9Y6B2 187 aa9.5□□□□□ -0.89
ZEB1-216ENST00000559496 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
ZEB1-216ENST00000559496 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-216ENST00000559496 GPAT2Q6NUI2 795 aa9.49□□□□□ -0.89
ZEB1-216ENST00000559496 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
ZEB1-216ENST00000559496 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
ZEB1-216ENST00000559496 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
ZEB1-216ENST00000559496 PLEKHG1Q9ULL1 1385 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 SETD1AO15047 1707 aaKnown RBP9.48□□□□□ -0.89
ZEB1-216ENST00000559496 AMPD1P23109 780 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 LTKP29376 864 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 TMF1P82094 1093 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 PLA2G4EQ3MJ16 856 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 LINC00114Q6XXX2 140 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 ARXQ96QS3 562 aa9.48□□□□□ -0.89
ZEB1-216ENST00000559496 CENPJQ9HC77 1338 aaPredicted RBP9.48□□□□□ -0.89
ZEB1-216ENST00000559496 IGFBP4P22692 258 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 FCHSD1Q86WN1 690 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 STK26Q9P289 416 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 DISP3Q9P2K9 1392 aa9.47□□□□□ -0.89
ZEB1-216ENST00000559496 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
ZEB1-216ENST00000559496 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
ZEB1-216ENST00000559496 LRPPRCP42704 1394 aaKnown RBP9.46□□□□□ -0.9
ZEB1-216ENST00000559496 DGKGP49619 791 aa9.46□□□□□ -0.9
ZEB1-216ENST00000559496 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
ZEB1-216ENST00000559496 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.9
ZEB1-216ENST00000559496 HIF1AQ16665 826 aa9.46□□□□□ -0.9
ZEB1-216ENST00000559496 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.9
ZEB1-216ENST00000559496 ADAMTS13Q76LX8 1427 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 SBNO2Q9Y2G9 1366 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 RFX1P22670 979 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 FAM200AQ8TCP9 573 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 HSH2DQ96JZ2 352 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
ZEB1-216ENST00000559496 METP08581 1390 aa9.44□□□□□ -0.9
ZEB1-216ENST00000559496 PIK3R2O00459 728 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms