RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 METTL24Q5JXM2 366 aa23.36■■□□□ 1.33
CASC4-209ENST00000559222 EPS15P42566 896 aa23.35■■□□□ 1.33
CASC4-209ENST00000559222 TAF1DQ9H5J8 278 aaPredicted RBP23.35■■□□□ 1.33
CASC4-209ENST00000559222 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
CASC4-209ENST00000559222 G3V3G9 751 aa23.34■■□□□ 1.33
CASC4-209ENST00000559222 DCAF8Q5TAQ9 597 aa23.34■■□□□ 1.33
CASC4-209ENST00000559222 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
CASC4-209ENST00000559222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
CASC4-209ENST00000559222 ARAP2Q8WZ64 1704 aa23.33■■□□□ 1.33
CASC4-209ENST00000559222 MXD3Q9BW11 206 aa23.33■■□□□ 1.33
CASC4-209ENST00000559222 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
CASC4-209ENST00000559222 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
CASC4-209ENST00000559222 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
CASC4-209ENST00000559222 PDE8BO95263 885 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 EPHX2P34913 555 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 GYG1P46976 350 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 TNIP1Q15025 636 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 COA1Q9GZY4 146 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 GPRC5DQ9NZD1 345 aa23.31■■□□□ 1.32
CASC4-209ENST00000559222 CIAO1O76071 339 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 TOMM70O94826 608 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 MS4A1P11836 297 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 RRP1P56182 461 aaKnown RBP23.3■■□□□ 1.32
CASC4-209ENST00000559222 UBE4AQ14139 1066 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 POLA2Q14181 598 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 C16orf71Q8IYS4 520 aaPredicted RBP23.3■■□□□ 1.32
CASC4-209ENST00000559222 CD209Q9NNX6 404 aa23.3■■□□□ 1.32
CASC4-209ENST00000559222 IQCA1LA6NCM1 817 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 VIL1P09327 827 aaKnown RBP23.29■■□□□ 1.32
CASC4-209ENST00000559222 FGFR2P21802 821 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 EAPPQ56P03 285 aaPredicted RBP23.29■■□□□ 1.32
CASC4-209ENST00000559222 CEP85Q6P2H3 762 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 FBXW7Q969H0 707 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 MYH13Q9UKX3 1938 aa23.29■■□□□ 1.32
CASC4-209ENST00000559222 PDE3AQ14432 1141 aa23.28■■□□□ 1.32
CASC4-209ENST00000559222 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
CASC4-209ENST00000559222 RBM46Q8TBY0 533 aaKnown RBP23.28■■□□□ 1.32
CASC4-209ENST00000559222 FAM84BQ96KN1 310 aaPredicted RBP23.28■■□□□ 1.32
CASC4-209ENST00000559222 JAG2Q9Y219 1238 aa23.28■■□□□ 1.32
CASC4-209ENST00000559222 USP17L3A6NCW0 530 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 USP17L4A6NCW7 530 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 EGFRP00533 1210 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
CASC4-209ENST00000559222 DACT2Q5SW24 774 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 USP17L1Q7RTZ2 530 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 MICALL2Q8IY33 904 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 TRPM4Q8TD43 1214 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 SSH3Q8TE77 659 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 ZBTB40Q9NUA8 1239 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 DDX19BQ9UMR2 479 aa23.27■■□□□ 1.32
CASC4-209ENST00000559222 ZNF609O15014 1411 aa23.26■■□□□ 1.31
CASC4-209ENST00000559222 IL15P40933 162 aaPredicted RBP23.26■■□□□ 1.31
CASC4-209ENST00000559222 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
CASC4-209ENST00000559222 RSBN1LQ6PCB5 846 aaPredicted RBP23.26■■□□□ 1.31
CASC4-209ENST00000559222 ZNF804AQ7Z570 1209 aa23.26■■□□□ 1.31
CASC4-209ENST00000559222 GMLQ99445 158 aa23.26■■□□□ 1.31
CASC4-209ENST00000559222 CNOT7Q9UIV1 285 aaKnown RBP23.26■■□□□ 1.31
CASC4-209ENST00000559222 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
CASC4-209ENST00000559222 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
CASC4-209ENST00000559222 IL1R1P14778 569 aa23.25■■□□□ 1.31
CASC4-209ENST00000559222 GTF2IP78347 998 aa23.25■■□□□ 1.31
CASC4-209ENST00000559222 TFCP2Q12800 502 aa23.25■■□□□ 1.31
CASC4-209ENST00000559222 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
CASC4-209ENST00000559222 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
CASC4-209ENST00000559222 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
CASC4-209ENST00000559222 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
CASC4-209ENST00000559222 COL1A1P02452 1464 aaPredicted RBP23.24■■□□□ 1.31
CASC4-209ENST00000559222 SASH1O94885 1247 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 ADORA1P30542 326 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 HIBADHP31937 336 aaKnown RBP23.23■■□□□ 1.31
CASC4-209ENST00000559222 BCAMP50895 628 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 ATP2B3Q16720 1220 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 SAMD7Q7Z3H4 446 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 DPF2Q92785 391 aa23.23■■□□□ 1.31
CASC4-209ENST00000559222 ADARB2Q9NS39 739 aaKnown RBP23.23■■□□□ 1.31
CASC4-209ENST00000559222 RPS12P25398 132 aaKnown RBP23.22■■□□□ 1.31
CASC4-209ENST00000559222 STRIP1Q5VSL9 837 aa23.22■■□□□ 1.31
CASC4-209ENST00000559222 TTLL5Q6EMB2 1281 aa23.22■■□□□ 1.31
CASC4-209ENST00000559222 TDRD7Q8NHU6 1098 aaKnown RBP23.22■■□□□ 1.31
CASC4-209ENST00000559222 SLC5A1P13866 664 aa23.21■■□□□ 1.31
CASC4-209ENST00000559222 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
CASC4-209ENST00000559222 CHADLQ6NUI6 762 aa23.21■■□□□ 1.31
CASC4-209ENST00000559222 LDHDQ86WU2 507 aa23.21■■□□□ 1.31
CASC4-209ENST00000559222 SMC1BQ8NDV3 1235 aa23.21■■□□□ 1.31
CASC4-209ENST00000559222 LPIN2Q92539 896 aa23.21■■□□□ 1.31
CASC4-209ENST00000559222 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
CASC4-209ENST00000559222 MAP1SQ66K74 1059 aaPredicted RBP23.2■■□□□ 1.3
CASC4-209ENST00000559222 AGBL3Q8NEM8 1001 aa23.2■■□□□ 1.3
CASC4-209ENST00000559222 CLEC11AQ9Y240 323 aa23.2■■□□□ 1.3
CASC4-209ENST00000559222 POLR2AP24928 1970 aaKnown RBP23.2■■□□□ 1.3
CASC4-209ENST00000559222 ASTN2O75129 1339 aaPredicted RBP23.19■■□□□ 1.3
CASC4-209ENST00000559222 SURF6O75683 361 aaKnown RBP23.19■■□□□ 1.3
CASC4-209ENST00000559222 TIMM10P62072 90 aa23.19■■□□□ 1.3
CASC4-209ENST00000559222 RBM26Q5T8P6 1007 aaKnown RBP23.19■■□□□ 1.3
CASC4-209ENST00000559222 USP50Q70EL3 339 aaPredicted RBP23.19■■□□□ 1.3
CASC4-209ENST00000559222 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
CASC4-209ENST00000559222 CRBNQ96SW2 442 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms