RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 USP17L1Q7RTZ2 530 aa14.45□□□□□ -0.1
CHRNA3-205ENST00000559080 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
CHRNA3-205ENST00000559080 MKI67P46013 3256 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-205ENST00000559080 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-205ENST00000559080 MXD3Q9BW11 206 aa14.44□□□□□ -0.1
CHRNA3-205ENST00000559080 HTTP42858 3142 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 A0A1B0GUL6 1792 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 PDE8AO60658 829 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 FKTNO75072 461 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 PTPN12Q05209 780 aaKnown RBP14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 CCDC27Q2M243 656 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 CCDC152Q4G0S7 254 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 DACT2Q5SW24 774 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 JARID2Q92833 1246 aaPredicted RBP14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 CCDC85AQ96PX6 553 aaPredicted RBP14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 PHAXQ9H814 394 aaKnown RBP14.43□□□□□ -0.1
CHRNA3-205ENST00000559080 ATP2B4P23634 1241 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 SREBF2Q12772 1141 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 TTLL12Q14166 644 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 HABP4Q5JVS0 413 aaKnown RBP14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 RIC3Q7Z5B4 369 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 CCDC191Q8NCU4 936 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 MED23Q9ULK4 1368 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 OTOFQ9HC10 1997 aa14.42□□□□□ -0.1
CHRNA3-205ENST00000559080 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 SPRYD7Q5W111 196 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 ANKRD18AQ8IVF6 992 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 MYD88Q99836 296 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 CENPFP49454 3210 aa14.41□□□□□ -0.1
CHRNA3-205ENST00000559080 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 NF2P35240 595 aa14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 TXNRD3Q86VQ6 643 aa14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 FZD1Q9UP38 647 aa14.4□□□□□ -0.1
CHRNA3-205ENST00000559080 SASH1O94885 1247 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 PRKG1Q13976 671 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 OGFOD1Q8N543 542 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 C8orf58Q8NAV2 365 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 ZBED3Q96IU2 234 aaPredicted RBP14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 IL16Q14005 1332 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 MYO3BQ8WXR4 1341 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 SSC5DA1L4H1 1573 aa14.39□□□□□ -0.11
CHRNA3-205ENST00000559080 BRCA2P51587 3418 aa14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 BSDC1Q9NW68 430 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 ANGEL1Q9UNK9 670 aaKnown RBP14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 TRIM17Q9Y577 477 aa14.38□□□□□ -0.11
CHRNA3-205ENST00000559080 DDX58O95786 925 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 MAP3K11Q16584 847 aa14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 FAM9BQ8IZU0 186 aa14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 TTLL11Q8NHH1 800 aa14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 COA1Q9GZY4 146 aa14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 COL1A1P02452 1464 aaPredicted RBP14.37□□□□□ -0.11
CHRNA3-205ENST00000559080 CEP290O15078 2479 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 IGF2BP3O00425 579 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 MMP14P50281 582 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 CTSWP56202 376 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 INHBEP58166 350 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 CAP1Q01518 475 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 TSPYL6Q8N831 410 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 CDC5LQ99459 802 aaKnown RBP14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 GREM2Q9H772 168 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 CACNA1FO60840 1977 aa14.36□□□□□ -0.11
CHRNA3-205ENST00000559080 ZBTB48P10074 688 aaPredicted RBP14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 KLRK1P26718 216 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 FXR1P51114 621 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 PTPN22Q9Y2R2 807 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 ZSWIM8A7E2V4 1837 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 FANCIQ9NVI1 1328 aa14.35□□□□□ -0.11
CHRNA3-205ENST00000559080 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
CHRNA3-205ENST00000559080 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
CHRNA3-205ENST00000559080 WNK4Q96J92 1243 aa14.34□□□□□ -0.11
CHRNA3-205ENST00000559080 CLMNQ96JQ2 1002 aa14.34□□□□□ -0.11
CHRNA3-205ENST00000559080 DEFB129Q9H1M3 183 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms