RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 SNRPNP63162 240 aaKnown RBP7.84□□□□□ -1.15
CASC4-207ENST00000559037 RASSF7Q02833 373 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 LINC00114Q6XXX2 140 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 TLR7Q9NYK1 1049 aaKnown RBP7.84□□□□□ -1.15
CASC4-207ENST00000559037 ZFATQ9P243 1243 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 POGZQ7Z3K3 1410 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 ZFYVE16Q7Z3T8 1539 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 ITSN2Q9NZM3 1697 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 MADDQ8WXG6 1647 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 CARNS1A5YM72 827 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 SASH3O75995 380 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 BRD1O95696 1058 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 MPSTP25325 297 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 TARSP26639 723 aaKnown RBP7.83□□□□□ -1.16
CASC4-207ENST00000559037 MZF1P28698 734 aaPredicted RBP7.83□□□□□ -1.16
CASC4-207ENST00000559037 EIF1AXP47813 144 aaKnown RBP7.83□□□□□ -1.16
CASC4-207ENST00000559037 PLAURQ03405 335 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 TMEM151AQ8N4L1 468 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 AFAP1Q8N556 730 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 TTC16Q8NEE8 873 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 CCER1Q8TC90 406 aaPredicted RBP7.83□□□□□ -1.16
CASC4-207ENST00000559037 GPR152Q8TDT2 470 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 KDM5CP41229 1560 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 ARHGEF12Q9NZN5 1544 aa7.83□□□□□ -1.16
CASC4-207ENST00000559037 ARID4BQ4LE39 1312 aaPredicted RBP7.82□□□□□ -1.16
CASC4-207ENST00000559037 ATP10AO60312 1499 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 PTPRMP28827 1452 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 M0R082 166 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 ZBTB39O15060 712 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 LILRB5O75023 590 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 GSK3AP49840 483 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 EHHADHQ08426 723 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 TBC1D8BQ0IIM8 1120 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 TRIP4Q15650 581 aaPredicted RBP7.82□□□□□ -1.16
CASC4-207ENST00000559037 CEP162Q5TB80 1403 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 C20orf204Q6ZNR8 217 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 KRT25Q7Z3Z0 450 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 MICALL1Q8N3F8 863 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 ZNF417Q8TAU3 575 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 ZNF587Q96SQ5 575 aaPredicted RBP7.82□□□□□ -1.16
CASC4-207ENST00000559037 HECW2Q9P2P5 1572 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 RIMS1Q86UR5 1692 aaKnown RBP7.82□□□□□ -1.16
CASC4-207ENST00000559037 GPATCH8Q9UKJ3 1502 aaKnown RBP7.82□□□□□ -1.16
CASC4-207ENST00000559037 FER1L4A9Z1Z3 1794 aa7.82□□□□□ -1.16
CASC4-207ENST00000559037 ZNF518AQ6AHZ1 1483 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 ICMTO60725 284 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 GDF11O95390 407 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 ABL1P00519 1130 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 XKR5Q6UX68 686 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 TTC9Q92623 222 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
CASC4-207ENST00000559037 IGFLR1Q9H665 355 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 MLH3Q9UHC1 1453 aa7.81□□□□□ -1.16
CASC4-207ENST00000559037 TRAPPC8Q9Y2L5 1435 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 ABCC1P33527 1531 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 ALBP02768 609 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 SCNN1AP37088 669 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 FAM35AQ86V20 835 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 ABI2Q9NYB9 513 aaPredicted RBP7.8□□□□□ -1.16
CASC4-207ENST00000559037 SAMD9LQ8IVG5 1584 aa7.8□□□□□ -1.16
CASC4-207ENST00000559037 PATL2C9JE40 543 aaKnown RBP7.79□□□□□ -1.16
CASC4-207ENST00000559037 MMP20O60882 483 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 PDGFAP04085 211 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 TTC39BQ5VTQ0 682 aaPredicted RBP7.79□□□□□ -1.16
CASC4-207ENST00000559037 GLYCTKQ8IVS8 523 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 EDEM1Q92611 657 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 GNEQ9Y223 722 aaKnown RBP7.79□□□□□ -1.16
CASC4-207ENST00000559037 REREQ9P2R6 1566 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 DIP2CQ9Y2E4 1556 aa7.79□□□□□ -1.16
CASC4-207ENST00000559037 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 ABCA6Q8N139 1617 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 H3BRB1 525 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 RGS9O75916 674 aaPredicted RBP7.78□□□□□ -1.16
CASC4-207ENST00000559037 HNRNPMP52272 730 aaKnown RBP eCLIP7.78□□□□□ -1.16
CASC4-207ENST00000559037 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
CASC4-207ENST00000559037 AAMPQ13685 434 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 ELMSAN1Q6PJG2 1045 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 CACTIN-AS1Q8N1I8 211 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 TUT1Q9H6E5 874 aaKnown RBP7.78□□□□□ -1.16
CASC4-207ENST00000559037 JPH1Q9HDC5 661 aaPredicted RBP7.78□□□□□ -1.16
CASC4-207ENST00000559037 NAGPAQ9UK23 515 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 MTUS2Q5JR59 1369 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
CASC4-207ENST00000559037 GHRHP01286 108 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 SPATA31C1P0DKV0 1188 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 NID1P14543 1247 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 HYAL2Q12891 473 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
CASC4-207ENST00000559037 MTMR3Q13615 1198 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms