RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 CHD1LQ86WJ1 897 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 GPATCH3Q96I76 525 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 ZC3H12CQ9C0D7 883 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 CCDC8Q9H0W5 538 aaPredicted RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 POLLQ9UGP5 575 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 BRCA1P38398 1863 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 MED23Q9ULK4 1368 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 NFKBIEO00221 500 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 RIMBP2O15034 1052 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 FGFR2P21802 821 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 TIMM10P62072 90 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 NUCB1Q02818 461 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 RASSF7Q02833 373 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 CCDC158Q5M9N0 1113 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 EAF2Q96CJ1 260 aaPredicted RBP8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 XAGE2Q96GT9 111 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 ZNF277Q9NRM2 450 aaPredicted RBP8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 SNED1Q8TER0 1413 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 DUOX1Q9NRD9 1551 aa8.09□□□□□ -1.11
CHRNA3-204ENST00000559002 WTIPA6NIX2 430 aaPredicted RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 FRAT2O75474 233 aaPredicted RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 KLRK1P26718 216 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 ADORA1P30542 326 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 HIBADHP31937 336 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 IARSP41252 1262 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 GYG1P46976 350 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 AOC3Q16853 763 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 TTC39AQ5SRH9 613 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 C15orf52Q6ZUT6 534 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 SKAP1Q86WV1 359 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 DBNDD2Q9BQY9 259 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 VPS33BQ9H267 617 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 DBNLQ9UJU6 430 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
CHRNA3-204ENST00000559002 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 MX1P20591 662 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 LMNB1P20700 586 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 BCAMP50895 628 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 FAM84BQ96KN1 310 aaPredicted RBP8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 A0A1B0GUL6 1792 aa8.07□□□□□ -1.12
CHRNA3-204ENST00000559002 IRS2Q9Y4H2 1338 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 ERC2O15083 957 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 ECE2O60344 883 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 UQCRFS1P1P0C7P4 283 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 PHKA1P46020 1223 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 FBXO33Q7Z6M2 555 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 TXNRD3Q86VQ6 643 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 C16orf71Q8IYS4 520 aaPredicted RBP8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 OTUD7AQ8TE49 926 aaPredicted RBP8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 FBXW7Q969H0 707 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 DBNDD1Q9H9R9 158 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 ECHDC1Q9NTX5 307 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
CHRNA3-204ENST00000559002 TTC41PQ6P2S7 1318 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 SEMA3EO15041 775 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 IL1R1P14778 569 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 RGS3P49796 1198 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 CHAF1AQ13111 956 aaPredicted RBP8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 TSHZ3Q63HK5 1081 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 CD209Q9NNX6 404 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 DENND2AQ9ULE3 1009 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 ARAP2Q8WZ64 1704 aa8.05□□□□□ -1.12
CHRNA3-204ENST00000559002 AOX1Q06278 1338 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 FER1L6Q2WGJ9 1857 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 GLRX3O76003 335 aaKnown RBP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 ATP5JP18859 108 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 PDE4AP27815 886 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 PDE1AP54750 535 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 EIF6P56537 245 aaKnown RBP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 PLEKHM2Q8IWE5 1019 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 TDRD7Q8NHU6 1098 aaKnown RBP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 BOLA2Q9H3K6 86 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 STAP2Q9UGK3 403 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 ZNRF3Q9ULT6 936 aa8.04□□□□□ -1.12
CHRNA3-204ENST00000559002 SALL3Q9BXA9 1300 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms