RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 G3V3G9 751 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 TIMM10P62072 90 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
GABPB1-208ENST00000558970 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 DCAF8Q5TAQ9 597 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 RHPN1Q8TCX5 695 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 EYA3Q99504 573 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 DBNDD1Q9H9R9 158 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
GABPB1-208ENST00000558970 A0A1B0GUL7 405 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 SLC5A1P13866 664 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 ADORA1P30542 326 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 GYG1P46976 350 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.04
GABPB1-208ENST00000558970 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 C9orf131Q5VYM1 1079 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.04
GABPB1-208ENST00000558970 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
GABPB1-208ENST00000558970 DCTPP1Q9H773 170 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
GABPB1-208ENST00000558970 MED23Q9ULK4 1368 aa15.33■□□□□ 0.04
GABPB1-208ENST00000558970 PSME4Q14997 1843 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
GABPB1-208ENST00000558970 LMNB1P20700 586 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 UBE4AQ14139 1066 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 AACSQ86V21 672 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 KIF1BPQ96EK5 621 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 CCDC136Q96JN2 1154 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 CCDC8Q9H0W5 538 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-208ENST00000558970 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
GABPB1-208ENST00000558970 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-208ENST00000558970 ECE2O60344 883 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 FGFR2P21802 821 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 LPIN2Q92539 896 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 TLR7Q9NYK1 1049 aaKnown RBP15.31■□□□□ 0.04
GABPB1-208ENST00000558970 JAG2Q9Y219 1238 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
GABPB1-208ENST00000558970 BCAMP50895 628 aa15.3■□□□□ 0.04
GABPB1-208ENST00000558970 GORABQ5T7V8 394 aa15.3■□□□□ 0.04
GABPB1-208ENST00000558970 ANKRD45Q5TZF3 282 aa15.3■□□□□ 0.04
GABPB1-208ENST00000558970 JDP2Q8WYK2 163 aa15.3■□□□□ 0.04
GABPB1-208ENST00000558970 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-208ENST00000558970 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
GABPB1-208ENST00000558970 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-208ENST00000558970 IRS2Q9Y4H2 1338 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 CAVIN4Q5BKX8 364 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 CLASRPQ8N2M8 674 aaKnown RBP15.29■□□□□ 0.04
GABPB1-208ENST00000558970 GCC1Q96CN9 775 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 KCNQ5Q9NR82 932 aa15.29■□□□□ 0.04
GABPB1-208ENST00000558970 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
GABPB1-208ENST00000558970 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-208ENST00000558970 IFIT2P09913 472 aaKnown RBP15.28■□□□□ 0.04
GABPB1-208ENST00000558970 PHKA1P46020 1223 aa15.28■□□□□ 0.04
GABPB1-208ENST00000558970 FAM84BQ96KN1 310 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-208ENST00000558970 LNPKQ9C0E8 428 aa15.28■□□□□ 0.04
GABPB1-208ENST00000558970 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
GABPB1-208ENST00000558970 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
GABPB1-208ENST00000558970 KIF3CO14782 793 aa15.27■□□□□ 0.04
GABPB1-208ENST00000558970 RAD17O75943 681 aa15.27■□□□□ 0.04
GABPB1-208ENST00000558970 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
GABPB1-208ENST00000558970 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.04
GABPB1-208ENST00000558970 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.04
GABPB1-208ENST00000558970 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 SMC5Q8IY18 1101 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-208ENST00000558970 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-208ENST00000558970 CD209Q9NNX6 404 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
GABPB1-208ENST00000558970 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
GABPB1-208ENST00000558970 COA1Q9GZY4 146 aa15.25■□□□□ 0.03
GABPB1-208ENST00000558970 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
GABPB1-208ENST00000558970 ZNRF3Q9ULT6 936 aa15.25■□□□□ 0.03
GABPB1-208ENST00000558970 ADAMTSL1Q8N6G6 1762 aa15.25■□□□□ 0.03
GABPB1-208ENST00000558970 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
GABPB1-208ENST00000558970 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
GABPB1-208ENST00000558970 GTF2IP78347 998 aa15.24■□□□□ 0.03
GABPB1-208ENST00000558970 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
GABPB1-208ENST00000558970 C15orf52Q6ZUT6 534 aaKnown RBP15.24■□□□□ 0.03
GABPB1-208ENST00000558970 FBXO33Q7Z6M2 555 aa15.24■□□□□ 0.03
GABPB1-208ENST00000558970 MXD3Q9BW11 206 aa15.24■□□□□ 0.03
GABPB1-208ENST00000558970 NDUFB9Q9Y6M9 179 aa15.24■□□□□ 0.03
GABPB1-208ENST00000558970 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms