RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 RSBN1LQ6PCB5 846 aaPredicted RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 PODNQ7Z5L7 613 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 FAM9BQ8IZU0 186 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 CAPNS2Q96L46 248 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 ZIC5Q96T25 663 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 CDC5LQ99459 802 aaKnown RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 MXD3Q9BW11 206 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 PRDM10Q9NQV6 1147 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 SNAP23O00161 211 aa7.09□□□□□ -1.27
SMAD3-209ENST00000558894 LBX1P52954 281 aa7.09□□□□□ -1.27
SMAD3-209ENST00000558894 MAPK8IP2Q13387 824 aaPredicted RBP7.09□□□□□ -1.27
SMAD3-209ENST00000558894 AGBL3Q8NEM8 1001 aa7.09□□□□□ -1.27
SMAD3-209ENST00000558894 ZNF804BA4D1E1 1349 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 UTYO14607 1347 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 OTOFQ9HC10 1997 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MYH13Q9UKX3 1938 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MAP2K2P36507 400 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 CTCFP49711 727 aaPredicted RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MAP2K1Q02750 393 aaPredicted RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 CHRNDQ07001 517 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 SCARF1Q14162 830 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 KIF4BQ2VIQ3 1234 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 RBM26Q5T8P6 1007 aaKnown RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 C15orf52Q6ZUT6 534 aaKnown RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MRPL50Q8N5N7 158 aaKnown RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 ZBED3Q96IU2 234 aaPredicted RBP7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MYH16Q9H6N6 1097 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 MYOZ2Q9NPC6 264 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 LEMD3Q9Y2U8 911 aa7.08□□□□□ -1.28
SMAD3-209ENST00000558894 GRM8O00222 908 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 TAF5LO75529 589 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 NBPF7P0C2Y1 421 aaPredicted RBP7.07□□□□□ -1.28
SMAD3-209ENST00000558894 ECE1P42892 770 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 STRIP1Q5VSL9 837 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 ANGEL2Q5VTE6 544 aaKnown RBP7.07□□□□□ -1.28
SMAD3-209ENST00000558894 KRT26Q7Z3Y9 468 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 CERS5Q8N5B7 392 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 CDCA5Q96FF9 252 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 ZNF594Q96JF6 807 aaPredicted RBP7.07□□□□□ -1.28
SMAD3-209ENST00000558894 COA1Q9GZY4 146 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 GGA3Q9NZ52 723 aa7.07□□□□□ -1.28
SMAD3-209ENST00000558894 SCAF8Q9UPN6 1271 aaKnown RBP7.07□□□□□ -1.28
SMAD3-209ENST00000558894 PITPNM2Q9BZ72 1349 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 ANKRD18BA2A2Z9 1011 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 WNT10BO00744 389 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 ALDH1L1O75891 902 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 IL1R1P14778 569 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 IGHMBP2P38935 993 aaKnown RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 BRPF1P55201 1214 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 HUNKP57058 714 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 SLFN5Q08AF3 891 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 RABL6Q3YEC7 729 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 LMBR1LQ6UX01 489 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 DCPSQ96C86 337 aaKnown RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 CDCA7LQ96GN5 454 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 ANKRD2Q9GZV1 360 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 GBA2Q9HCG7 927 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-209ENST00000558894 CD209Q9NNX6 404 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 TSKSQ9UJT2 592 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 SSC5DA1L4H1 1573 aa7.06□□□□□ -1.28
SMAD3-209ENST00000558894 AOX1Q06278 1338 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 GRM1Q13255 1194 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 IFIT5Q13325 482 aaKnown RBP7.05□□□□□ -1.28
SMAD3-209ENST00000558894 RGMBQ6NW40 437 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 PAXIP1Q6ZW49 1069 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-209ENST00000558894 MOB2Q70IA6 237 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 ANKRD44Q8N8A2 993 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 SSH1Q8WYL5 1049 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 AIDAQ96BJ3 306 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 SUCLG2Q96I99 432 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 PUS3Q9BZE2 481 aaKnown RBP7.05□□□□□ -1.28
SMAD3-209ENST00000558894 SRCIN1Q9C0H9 1055 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 PCDHAC2Q9Y5I4 1007 aa7.05□□□□□ -1.28
SMAD3-209ENST00000558894 MYO3BQ8WXR4 1341 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 G3V3G9 751 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
SMAD3-209ENST00000558894 SASH1O94885 1247 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 SLC10A3P09131 477 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 RGS19P49795 217 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 GTF2IP78347 998 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-209ENST00000558894 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-209ENST00000558894 NOGQ13253 232 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 DCAF8Q5TAQ9 597 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 PRAMEF18Q5VWM3 479 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 TTLL5Q6EMB2 1281 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 SULF1Q8IWU6 871 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 VGLL2Q8N8G2 317 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 MTMR14Q8NCE2 650 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms