RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
TSPAN3-205ENST00000558745 ZBTB7BO15156 539 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 EPHX2P34913 555 aa17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 TNIP1Q15025 636 aa17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 MXD3Q9BW11 206 aa17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 IRS2Q9Y4H2 1338 aa17.29■□□□□ 0.36
TSPAN3-205ENST00000558745 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
TSPAN3-205ENST00000558745 GNAI2P04899 355 aa17.28■□□□□ 0.36
TSPAN3-205ENST00000558745 HTRA3P83110 453 aa17.28■□□□□ 0.36
TSPAN3-205ENST00000558745 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
TSPAN3-205ENST00000558745 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
TSPAN3-205ENST00000558745 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
TSPAN3-205ENST00000558745 EYA2O00167 538 aa17.27■□□□□ 0.36
TSPAN3-205ENST00000558745 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
TSPAN3-205ENST00000558745 ATG9AQ7Z3C6 839 aa17.27■□□□□ 0.36
TSPAN3-205ENST00000558745 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
TSPAN3-205ENST00000558745 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 PODNQ7Z5L7 613 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 CNOT7Q9UIV1 285 aaKnown RBP17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
TSPAN3-205ENST00000558745 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 GYG1P46976 350 aa17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
TSPAN3-205ENST00000558745 PDE8BO95263 885 aa17.24■□□□□ 0.35
TSPAN3-205ENST00000558745 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-205ENST00000558745 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
TSPAN3-205ENST00000558745 SCN4AP35499 1836 aa17.24■□□□□ 0.35
TSPAN3-205ENST00000558745 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 HSPA1AP0DMV8 641 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 HSPA1BP0DMV9 641 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 GTF2IP78347 998 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 C15orf52Q6ZUT6 534 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 SAMD7Q7Z3H4 446 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 MICALL2Q8IY33 904 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-205ENST00000558745 EGFRP00533 1210 aa17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 MTX1Q13505 466 aa17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
TSPAN3-205ENST00000558745 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 DPF2Q92785 391 aa17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 IQSEC3Q9UPP2 1182 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-205ENST00000558745 H7C1D1 291 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 MS4A1P11836 297 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 FGFR2P21802 821 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 BCAMP50895 628 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 ZNF804AQ7Z570 1209 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 LDHDQ86WU2 507 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 GMLQ99445 158 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.34
TSPAN3-205ENST00000558745 CIAO1O76071 339 aa17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 IL1R1P14778 569 aa17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 TFCP2Q12800 502 aa17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-205ENST00000558745 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-205ENST00000558745 POLA2Q14181 598 aa17.19■□□□□ 0.34
TSPAN3-205ENST00000558745 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
TSPAN3-205ENST00000558745 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
TSPAN3-205ENST00000558745 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-205ENST00000558745 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 ITGBL1O95965 494 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 TIMM10P62072 90 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 DLK2Q6UY11 383 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
TSPAN3-205ENST00000558745 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms