RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 PPFIA4O75335 1185 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 APPP05067 770 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■□□□□ 9.3
HMBOX1-212ENST00000558662 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 DONSONQ9NYP3 566 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 ABCC6O95255 1503 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 GYS2P54840 703 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 HSP90B2PQ58FF3 399 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 CEP112Q8N8E3 955 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 USP44Q9H0E7 712 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 KIAA1468Q9P260 1216 aa18.72■□□□□ 0.59
HMBOX1-212ENST00000558662 NLRP12P59046 1061 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 CEP120Q8N960 986 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 MSANTD4Q8NCY6 345 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 MRPS27Q92552 414 aaKnown RBP18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 CCDC34Q96HJ3 373 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 ALKQ9UM73 1620 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 TMEM131LA2VDJ0 1609 aa18.71■□□□□ 0.59
HMBOX1-212ENST00000558662 ADD1P35611 737 aaKnown RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 TRDNQ13061 729 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 TOB2Q14106 344 aaPredicted RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 SMARCC2Q8TAQ2 1214 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 BRF1Q92994 677 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 H3BQF6 201 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 GNL2Q13823 731 aaKnown RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 DNAJC21Q5F1R6 531 aaKnown RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 ADALQ6DHV7 355 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 TADA2BQ86TJ2 420 aa18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 FMR1NBQ8N0W7 255 aaPredicted RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
HMBOX1-212ENST00000558662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 STX10O60499 249 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 BEND6Q5SZJ8 279 aaPredicted RBP18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 VIPAS39Q9H9C1 493 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 VPS18Q9P253 973 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 STK26Q9P289 416 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 PPP2R2CQ9Y2T4 447 aa18.69■□□□□ 0.58
HMBOX1-212ENST00000558662 VWA3AA6NCI4 1184 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 FANCCQ00597 558 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 SRGAP1Q7Z6B7 1085 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 FSIP1Q8NA03 581 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 GOLPH3LQ9H4A5 285 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 ATP6V1AP38606 617 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 MTX1Q13505 466 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 MCM10Q7L590 875 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 DRC1Q96MC2 740 aa18.68■□□□□ 0.58
HMBOX1-212ENST00000558662 MAP4K4O95819 1239 aaPredicted RBP18.67■□□□□ 0.58
HMBOX1-212ENST00000558662 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
HMBOX1-212ENST00000558662 CXorf56Q9H5V9 222 aa18.67■□□□□ 0.58
HMBOX1-212ENST00000558662 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
HMBOX1-212ENST00000558662 USPL1Q5W0Q7 1092 aa18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 VSTM4Q8IW00 320 aa18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 A1CFQ9NQ94 594 aaKnown RBP18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 RTEL1Q9NZ71 1219 aa18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
HMBOX1-212ENST00000558662 HMGB1P09429 215 aaKnown RBP18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 MCM3P25205 808 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 GNG11P61952 73 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 ANKRD20A12PQ8NF67 263 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 KCNG4Q8TDN1 519 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 MYO5BQ9ULV0 1848 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 NCAPHQ15003 741 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 STAG1Q8WVM7 1258 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
HMBOX1-212ENST00000558662 NALCNQ8IZF0 1738 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 NUTM2FA1L443 756 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 YEATS4O95619 227 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 LRRC31Q6UY01 552 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 AGLP35573 1532 aa18.64■□□□□ 0.57
HMBOX1-212ENST00000558662 ATXN2Q99700 1313 aaKnown RBP18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 A6NNZ2 444 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 MAP2K2P36507 400 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 ME1P48163 572 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 AARSP49588 968 aaKnown RBP eCLIP18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 UBASH3AP57075 661 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 TUBB8Q3ZCM7 444 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 PFKFB2O60825 505 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 ALDH1L1O75891 902 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 BCCIPQ9P287 314 aaKnown RBP eCLIP18.63■□□□□ 0.57
HMBOX1-212ENST00000558662 CUTAO60888 179 aa18.62■□□□□ 0.57
HMBOX1-212ENST00000558662 IFIT2P09913 472 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms