RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 PIK3R5Q8WYR1 880 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 FAM161BQ96MY7 647 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 USP3Q9Y6I4 520 aa13.71□□□□□ -0.21
MARK3-213ENST00000558611 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
MARK3-213ENST00000558611 PXDNQ92626 1479 aa13.7□□□□□ -0.22
MARK3-213ENST00000558611 RTN1Q16799 776 aa13.7□□□□□ -0.22
MARK3-213ENST00000558611 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
MARK3-213ENST00000558611 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
MARK3-213ENST00000558611 NIF3L1Q9GZT8 377 aa13.7□□□□□ -0.22
MARK3-213ENST00000558611 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
MARK3-213ENST00000558611 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
MARK3-213ENST00000558611 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 LRP6O75581 1613 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 RAD51AP2Q09MP3 1159 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 FAM26DQ5JW98 314 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 ATCAYQ86WG3 371 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
MARK3-213ENST00000558611 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
MARK3-213ENST00000558611 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
MARK3-213ENST00000558611 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
MARK3-213ENST00000558611 ADH1AP07327 375 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 NR3C2P08235 984 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 NOS2P35228 1153 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 CLN3Q13286 438 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 C9orf131Q5VYM1 1079 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 ALDH16A1Q8IZ83 802 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 VTI1BQ9UEU0 232 aa13.68□□□□□ -0.22
MARK3-213ENST00000558611 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
MARK3-213ENST00000558611 FANCCQ00597 558 aa13.67□□□□□ -0.22
MARK3-213ENST00000558611 ETFBKMTQ8IXQ9 262 aa13.67□□□□□ -0.22
MARK3-213ENST00000558611 RNF34Q969K3 372 aa13.67□□□□□ -0.22
MARK3-213ENST00000558611 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
MARK3-213ENST00000558611 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.67□□□□□ -0.22
MARK3-213ENST00000558611 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
MARK3-213ENST00000558611 ATP7BP35670 1465 aa13.67□□□□□ -0.22
MARK3-213ENST00000558611 SOS2Q07890 1332 aaPredicted RBP13.66□□□□□ -0.22
MARK3-213ENST00000558611 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 NBPF8Q3BBV2 869 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
MARK3-213ENST00000558611 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 ZDHHC1Q8WTX9 485 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
MARK3-213ENST00000558611 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 PDGFAP04085 211 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 ZAP70P43403 619 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
MARK3-213ENST00000558611 ZNF295-AS1Q8N0V1 137 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 EDEM1Q92611 657 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
MARK3-213ENST00000558611 FRMD6Q96NE9 622 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
MARK3-213ENST00000558611 TGIF2Q9GZN2 237 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
MARK3-213ENST00000558611 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
MARK3-213ENST00000558611 WNT7AO00755 349 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
MARK3-213ENST00000558611 GNA15P30679 374 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 DGKZQ13574 1117 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
MARK3-213ENST00000558611 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 IFT43Q96FT9 208 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
MARK3-213ENST00000558611 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 AKAP12Q02952 1782 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
MARK3-213ENST00000558611 PCSK2P16519 638 aa13.62□□□□□ -0.23
MARK3-213ENST00000558611 ZNF76P36508 570 aa13.62□□□□□ -0.23
MARK3-213ENST00000558611 CENPCQ03188 943 aa13.62□□□□□ -0.23
MARK3-213ENST00000558611 C1orf53Q5VUE5 145 aa13.62□□□□□ -0.23
MARK3-213ENST00000558611 KDF1Q8NAX2 398 aaPredicted RBP13.62□□□□□ -0.23
MARK3-213ENST00000558611 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
MARK3-213ENST00000558611 NEFLP07196 543 aa13.61□□□□□ -0.23
MARK3-213ENST00000558611 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
MARK3-213ENST00000558611 SLC43A3Q8NBI5 491 aa13.61□□□□□ -0.23
MARK3-213ENST00000558611 PHACTR1Q9C0D0 580 aa13.61□□□□□ -0.23
MARK3-213ENST00000558611 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
MARK3-213ENST00000558611 LIAT1Q6ZQX7 453 aa13.6□□□□□ -0.23
MARK3-213ENST00000558611 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
MARK3-213ENST00000558611 RPLP1P05386 114 aaKnown RBP13.59□□□□□ -0.23
MARK3-213ENST00000558611 MRGPRX2Q96LB1 330 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 CFHR5Q9BXR6 569 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 FAM13BQ9NYF5 915 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 AK5Q9Y6K8 562 aa13.59□□□□□ -0.23
MARK3-213ENST00000558611 PHRF1Q9P1Y6 1649 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms