RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 NF2P35240 595 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 INHBEP58166 350 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 TRIM26Q12899 539 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-207ENST00000558500 LDLRAD1Q5T700 205 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 SPRYD7Q5W111 196 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 ISCA1Q9BUE6 129 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 TAOK2Q9UL54 1235 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 TRIOBPQ9H2D6 2365 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 USP17L3A6NCW0 530 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 USP17L4A6NCW7 530 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 MANSC4A6NHS7 340 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-207ENST00000558500 USP17L1Q7RTZ2 530 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 ARMC9Q7Z3E5 817 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 IFNL1Q8IU54 200 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 PLEKHF1Q96S99 279 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 CEP290O15078 2479 aa8.86□□□□□ -0.99
LRRC28-207ENST00000558500 COL4A1P02462 1669 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 DLL1O00548 723 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 WNT10BO00744 389 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-207ENST00000558500 PRKG1Q13976 671 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 RTL5Q5HYW3 569 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-207ENST00000558500 PLBD2Q8NHP8 589 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 CD99L2Q8TCZ2 262 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 BABAM1Q9NWV8 329 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 LAMB2P55268 1798 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 HTTP42858 3142 aa8.85□□□□□ -0.99
LRRC28-207ENST00000558500 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 IGF2BP3O00425 579 aaKnown RBP eCLIP8.84□□□□□ -0.99
LRRC28-207ENST00000558500 EVX2Q03828 476 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 DACT2Q5SW24 774 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-207ENST00000558500 OTUD5Q96G74 571 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 ZNF333Q96JL9 665 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 TMEM106CQ9BVX2 250 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 EFCC1Q9HA90 598 aa8.84□□□□□ -0.99
LRRC28-207ENST00000558500 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
LRRC28-207ENST00000558500 XDHP47989 1333 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 MKI67P46013 3256 aaKnown RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 KIAA0100Q14667 2235 aaKnown RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 H0YGN5 161 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 SASH1O94885 1247 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 ZBTB48P10074 688 aaPredicted RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 ATP2B4P23634 1241 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 TRIM28Q13263 835 aaKnown RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 SLC10A4Q96EP9 437 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 MXD3Q9BW11 206 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 CHPF2Q9P2E5 772 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 FZD1Q9UP38 647 aa8.83□□□□□ -1
LRRC28-207ENST00000558500 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
LRRC28-207ENST00000558500 SCN9AQ15858 1988 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 MYO3BQ8WXR4 1341 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 MMP14P50281 582 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 CAP1Q01518 475 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 SP3Q02447 781 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 CRHR2Q13324 411 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 MAP3K11Q16584 847 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 APOBEC3FQ8IUX4 373 aaKnown RBP8.82□□□□□ -1
LRRC28-207ENST00000558500 SLC17A8Q8NDX2 589 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 WNK4Q96J92 1243 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 CLMNQ96JQ2 1002 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 SZT2Q5T011 3432 aa8.82□□□□□ -1
LRRC28-207ENST00000558500 TAF1P21675 1872 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 WTIPA6NIX2 430 aaPredicted RBP8.81□□□□□ -1
LRRC28-207ENST00000558500 UNCXA6NJT0 531 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
LRRC28-207ENST00000558500 NUBP1P53384 320 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 KRT24Q2M2I5 525 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 CCDC152Q4G0S7 254 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 STRIP1Q5VSL9 837 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 ZBTB38Q8NAP3 1195 aaPredicted RBP8.81□□□□□ -1
LRRC28-207ENST00000558500 SPRYD3Q8NCJ5 442 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 ZBED3Q96IU2 234 aaPredicted RBP8.81□□□□□ -1
LRRC28-207ENST00000558500 PNNQ9H307 717 aaKnown RBP8.81□□□□□ -1
LRRC28-207ENST00000558500 MED23Q9ULK4 1368 aa8.81□□□□□ -1
LRRC28-207ENST00000558500 RIPK4P57078 832 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 SLC4A8Q2Y0W8 1093 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 SLC9C1Q4G0N8 1177 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 NBPF11Q86T75 865 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 ANKRD18AQ8IVF6 992 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 RASEFQ8IZ41 740 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 FBXW7Q969H0 707 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 PTPN18Q99952 460 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 COA1Q9GZY4 146 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 DEFB129Q9H1M3 183 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms