RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 MRPS27Q92552 414 aaKnown RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 VWA3AA6NCI4 1184 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 EIF3CLB5ME19 914 aaKnown RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 PSEN1P49768 467 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 NMIQ13287 307 aaPredicted RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 MTX1Q13505 466 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 EIF3CQ99613 913 aaKnown RBP12.98□□□□□ -0.33
PCAT29-201ENST00000558411 DEF6Q9H4E7 631 aa12.98□□□□□ -0.33
PCAT29-201ENST00000558411 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
PCAT29-201ENST00000558411 USP5P45974 858 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 NLRP12P59046 1061 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 FANCCQ00597 558 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 STK3Q13188 491 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
PCAT29-201ENST00000558411 NCAPHQ15003 741 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 DPCR1Q3MIW9 517 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 HDXQ7Z353 690 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 SECISBP2LQ93073 1101 aaKnown RBP12.97□□□□□ -0.33
PCAT29-201ENST00000558411 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
PCAT29-201ENST00000558411 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 SDF4Q9BRK5 362 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 PPP2R2CQ9Y2T4 447 aa12.97□□□□□ -0.33
PCAT29-201ENST00000558411 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
PCAT29-201ENST00000558411 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
PCAT29-201ENST00000558411 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 USP28Q96RU2 1077 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 VPS18Q9P253 973 aa12.96□□□□□ -0.33
PCAT29-201ENST00000558411 KDRP35968 1356 aa12.96□□□□□ -0.34
PCAT29-201ENST00000558411 A0A087WWV3 80 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 OVOS2A0A0J9YW53 1432 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 ERLIN1O75477 346 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 ME1P48163 572 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
PCAT29-201ENST00000558411 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
PCAT29-201ENST00000558411 OVOS2Q6IE36 1432 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 EFCAB13Q8IY85 973 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 EPC1Q9H2F5 836 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 CLGNO14967 610 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 CCDC91Q7Z6B0 441 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 VSTM4Q8IW00 320 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
PCAT29-201ENST00000558411 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
PCAT29-201ENST00000558411 RIMS1Q86UR5 1692 aaKnown RBP12.95□□□□□ -0.34
PCAT29-201ENST00000558411 PFKFB2O60825 505 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 GNG11P61952 73 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
PCAT29-201ENST00000558411 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 FAM71BQ8TC56 605 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 RTEL1Q9NZ71 1219 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 FOXO3O43524 673 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 TUBBP07437 444 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 CHMP4CQ96CF2 233 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
PCAT29-201ENST00000558411 NEK1Q96PY6 1258 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 CEP89Q96ST8 783 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 PDE11AQ9HCR9 933 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
PCAT29-201ENST00000558411 NEDD4P46934 1319 aa12.93□□□□□ -0.34
PCAT29-201ENST00000558411 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
PCAT29-201ENST00000558411 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
PCAT29-201ENST00000558411 SCRN1Q12765 414 aa12.93□□□□□ -0.34
PCAT29-201ENST00000558411 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
PCAT29-201ENST00000558411 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
PCAT29-201ENST00000558411 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
PCAT29-201ENST00000558411 WDR24Q96S15 920 aa12.93□□□□□ -0.34
PCAT29-201ENST00000558411 FTOQ9C0B1 505 aaKnown RBP eCLIP12.93□□□□□ -0.34
PCAT29-201ENST00000558411 USP31Q70CQ4 1352 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 STX10O60499 249 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
PCAT29-201ENST00000558411 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
PCAT29-201ENST00000558411 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
PCAT29-201ENST00000558411 UBASH3AP57075 661 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms