RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 USP17L8P0C7I0 530 aa19.78■□□□□ 0.76
TPM1-211ENST00000558314 MAP2K2P36507 400 aa19.78■□□□□ 0.76
TPM1-211ENST00000558314 ANGEL2Q5VTE6 544 aaKnown RBP19.78■□□□□ 0.76
TPM1-211ENST00000558314 PODNQ7Z5L7 613 aa19.78■□□□□ 0.76
TPM1-211ENST00000558314 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
TPM1-211ENST00000558314 MYOZ2Q9NPC6 264 aa19.77■□□□□ 0.76
TPM1-211ENST00000558314 MED23Q9ULK4 1368 aa19.77■□□□□ 0.76
TPM1-211ENST00000558314 ANKRD18BA2A2Z9 1011 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 KLRK1P26718 216 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 SLC4A10Q6U841 1118 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 TXNRD3Q86VQ6 643 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 ZIC5Q96T25 663 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 MYH3P11055 1940 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 ZNF804BA4D1E1 1349 aa19.76■□□□□ 0.75
TPM1-211ENST00000558314 ZNF157P51786 506 aaPredicted RBP19.75■□□□□ 0.75
TPM1-211ENST00000558314 CASP7P55210 303 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
TPM1-211ENST00000558314 RGMBQ6NW40 437 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 HELBQ8NG08 1087 aaPredicted RBP19.75■□□□□ 0.75
TPM1-211ENST00000558314 HHIPL1Q96JK4 782 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 PLA2G12BQ9BX93 195 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 ANKRD2Q9GZV1 360 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 LEMD3Q9Y2U8 911 aa19.75■□□□□ 0.75
TPM1-211ENST00000558314 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
TPM1-211ENST00000558314 TAF7LQ5H9L4 462 aa19.74■□□□□ 0.75
TPM1-211ENST00000558314 COA1Q9GZY4 146 aa19.74■□□□□ 0.75
TPM1-211ENST00000558314 PLIN1O60240 522 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 TAF5LO75529 589 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 CSF1RP07333 972 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 CHRNDQ07001 517 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 NOGQ13253 232 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
TPM1-211ENST00000558314 BEND3Q5T5X7 828 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 OGFOD1Q8N543 542 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 GMLQ99445 158 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 THSD7BQ9C0I4 1608 aa19.73■□□□□ 0.75
TPM1-211ENST00000558314 SNAP23O00161 211 aa19.72■□□□□ 0.75
TPM1-211ENST00000558314 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
TPM1-211ENST00000558314 DACT2Q5SW24 774 aa19.72■□□□□ 0.75
TPM1-211ENST00000558314 PRAMEF18Q5VWM3 479 aa19.72■□□□□ 0.75
TPM1-211ENST00000558314 C9orf78Q9NZ63 289 aaPredicted RBP19.72■□□□□ 0.75
TPM1-211ENST00000558314 GTF2IP78347 998 aa19.71■□□□□ 0.75
TPM1-211ENST00000558314 TTLL12Q14166 644 aaPredicted RBP19.71■□□□□ 0.75
TPM1-211ENST00000558314 NBPF9Q3BBW0 867 aa19.71■□□□□ 0.75
TPM1-211ENST00000558314 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
TPM1-211ENST00000558314 LMBR1LQ6UX01 489 aa19.71■□□□□ 0.75
TPM1-211ENST00000558314 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
TPM1-211ENST00000558314 ZNF594Q96JF6 807 aaPredicted RBP19.71■□□□□ 0.75
TPM1-211ENST00000558314 SASH1O94885 1247 aa19.7■□□□□ 0.74
TPM1-211ENST00000558314 FOXO4P98177 505 aa19.7■□□□□ 0.74
TPM1-211ENST00000558314 STRIP1Q5VSL9 837 aa19.7■□□□□ 0.74
TPM1-211ENST00000558314 ABHD8Q96I13 439 aa19.7■□□□□ 0.74
TPM1-211ENST00000558314 GRM8O00222 908 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 CA12O43570 354 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 KIF23Q02241 960 aaPredicted RBP19.69■□□□□ 0.74
TPM1-211ENST00000558314 CCDC57Q2TAC2 916 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 MOB2Q70IA6 237 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 CCDC102AQ96A19 550 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 CNNM1Q9NRU3 951 aa19.69■□□□□ 0.74
TPM1-211ENST00000558314 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
TPM1-211ENST00000558314 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.68■□□□□ 0.74
TPM1-211ENST00000558314 HDAC9Q9UKV0 1011 aa19.68■□□□□ 0.74
TPM1-211ENST00000558314 JAG2Q9Y219 1238 aa19.68■□□□□ 0.74
TPM1-211ENST00000558314 MYO3BQ8WXR4 1341 aa19.68■□□□□ 0.74
TPM1-211ENST00000558314 CCDC85CA6NKD9 419 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 FAM155AB1AL88 458 aaPredicted RBP19.67■□□□□ 0.74
TPM1-211ENST00000558314 F8W031 263 aaPredicted RBP19.67■□□□□ 0.74
TPM1-211ENST00000558314 PRKG1Q13976 671 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 LDHAL6AQ6ZMR3 332 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 PSME4Q14997 1843 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 ZNF609O15014 1411 aa19.67■□□□□ 0.74
TPM1-211ENST00000558314 WNT10BO00744 389 aa19.66■□□□□ 0.74
TPM1-211ENST00000558314 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
TPM1-211ENST00000558314 UBE2Q2LH0YL09 131 aa19.65■□□□□ 0.74
TPM1-211ENST00000558314 SLC10A3P09131 477 aa19.65■□□□□ 0.74
TPM1-211ENST00000558314 ZNF804AQ7Z570 1209 aa19.65■□□□□ 0.74
TPM1-211ENST00000558314 PITPNM2Q9BZ72 1349 aa19.65■□□□□ 0.74
TPM1-211ENST00000558314 TRPA1O75762 1119 aa19.64■□□□□ 0.73
TPM1-211ENST00000558314 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
TPM1-211ENST00000558314 NF2P35240 595 aa19.64■□□□□ 0.73
TPM1-211ENST00000558314 SUCLG2Q96I99 432 aa19.64■□□□□ 0.73
TPM1-211ENST00000558314 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
TPM1-211ENST00000558314 DGKZQ13574 1117 aa19.63■□□□□ 0.73
TPM1-211ENST00000558314 RASAL3Q86YV0 1011 aa19.63■□□□□ 0.73
TPM1-211ENST00000558314 DLGAP5Q15398 846 aa19.62■□□□□ 0.73
TPM1-211ENST00000558314 CASP8AP2Q9UKL3 1982 aa19.61■□□□□ 0.73
TPM1-211ENST00000558314 RBM5P52756 815 aaKnown RBP eCLIP19.61■□□□□ 0.73
TPM1-211ENST00000558314 FKBP1BP68106 108 aa19.61■□□□□ 0.73
TPM1-211ENST00000558314 MRPL50Q8N5N7 158 aaKnown RBP19.61■□□□□ 0.73
TPM1-211ENST00000558314 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
TPM1-211ENST00000558314 PUS3Q9BZE2 481 aaKnown RBP19.61■□□□□ 0.73
TPM1-211ENST00000558314 MCOLN1Q9GZU1 580 aa19.61■□□□□ 0.73
TPM1-211ENST00000558314 RNF186Q9NXI6 227 aa19.61■□□□□ 0.73
TPM1-211ENST00000558314 NBPF7P0C2Y1 421 aaPredicted RBP19.6■□□□□ 0.73
TPM1-211ENST00000558314 APOBEC3FQ8IUX4 373 aaKnown RBP19.6■□□□□ 0.73
TPM1-211ENST00000558314 CERS5Q8N5B7 392 aa19.6■□□□□ 0.73
TPM1-211ENST00000558314 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms