RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
LRRC28-204ENST00000558172 AOC3Q16853 763 aa12.91□□□□□ -0.34
LRRC28-204ENST00000558172 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
LRRC28-204ENST00000558172 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
LRRC28-204ENST00000558172 LRRCC1Q9C099 1032 aa12.91□□□□□ -0.34
LRRC28-204ENST00000558172 ZC3H4Q9UPT8 1303 aaKnown RBP12.9□□□□□ -0.34
LRRC28-204ENST00000558172 PSME4Q14997 1843 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 UTRNP46939 3433 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
LRRC28-204ENST00000558172 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 RNF181Q9P0P0 153 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 TIAM2Q8IVF5 1701 aa12.9□□□□□ -0.34
LRRC28-204ENST00000558172 IRS2Q9Y4H2 1338 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-204ENST00000558172 SNAP23O00161 211 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 PRELPP51888 382 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 TIMM10P62072 90 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-204ENST00000558172 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-204ENST00000558172 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
LRRC28-204ENST00000558172 APBB1O00213 710 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 IGHDP01880 384 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
LRRC28-204ENST00000558172 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
LRRC28-204ENST00000558172 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 ZNF609O15014 1411 aa12.88□□□□□ -0.35
LRRC28-204ENST00000558172 FZD9O00144 591 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 ZBTB22O15209 634 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 ECE2O60344 883 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 KLRK1P26718 216 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
LRRC28-204ENST00000558172 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 FBXO33Q7Z6M2 555 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
LRRC28-204ENST00000558172 XAGE2Q96GT9 111 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 GNL3LQ9NVN8 582 aaKnown RBP12.87□□□□□ -0.35
LRRC28-204ENST00000558172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
LRRC28-204ENST00000558172 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
LRRC28-204ENST00000558172 IL1R1P14778 569 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 GYG1P46976 350 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 ANKRD45Q5TZF3 282 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 AACSQ86V21 672 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 DBNDD1Q9H9R9 158 aa12.86□□□□□ -0.35
LRRC28-204ENST00000558172 SEMA3EO15041 775 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 IFIT2P09913 472 aaKnown RBP12.85□□□□□ -0.35
LRRC28-204ENST00000558172 BCAMP50895 628 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 TNIP1Q15025 636 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
LRRC28-204ENST00000558172 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 CCDC8Q9H0W5 538 aaPredicted RBP12.85□□□□□ -0.35
LRRC28-204ENST00000558172 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 COL4A5P29400 1685 aa12.85□□□□□ -0.35
LRRC28-204ENST00000558172 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
LRRC28-204ENST00000558172 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-204ENST00000558172 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-204ENST00000558172 UQCRFS1P1P0C7P4 283 aa12.84□□□□□ -0.35
LRRC28-204ENST00000558172 ADORA1P30542 326 aa12.84□□□□□ -0.35
LRRC28-204ENST00000558172 CIAPIN1Q6FI81 312 aa12.84□□□□□ -0.35
LRRC28-204ENST00000558172 ZNF512BQ96KM6 892 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-204ENST00000558172 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
LRRC28-204ENST00000558172 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
LRRC28-204ENST00000558172 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 NUCB1Q02818 461 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 CXCL9Q07325 125 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 TTLL5Q6EMB2 1281 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 CENPQQ7L2Z9 268 aaPredicted RBP12.83□□□□□ -0.36
LRRC28-204ENST00000558172 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 FAM205AQ6ZU69 1335 aa12.83□□□□□ -0.36
LRRC28-204ENST00000558172 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
LRRC28-204ENST00000558172 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
LRRC28-204ENST00000558172 PHKA1P46020 1223 aa12.82□□□□□ -0.36
LRRC28-204ENST00000558172 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
LRRC28-204ENST00000558172 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
LRRC28-204ENST00000558172 GPC2Q8N158 579 aa12.82□□□□□ -0.36
LRRC28-204ENST00000558172 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
LRRC28-204ENST00000558172 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
LRRC28-204ENST00000558172 SCN4AP35499 1836 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms