RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TTC37Q6PGP7 1564 aa10.08□□□□□ -0.8
RTF1-204ENST00000558117 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
RTF1-204ENST00000558117 FZD6O60353 706 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 ALBP02768 609 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 NRLP54845 237 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 GPLD1P80108 840 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 MLLT1Q03111 559 aaPredicted RBP10.07□□□□□ -0.8
RTF1-204ENST00000558117 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
RTF1-204ENST00000558117 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
RTF1-204ENST00000558117 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 POGZQ7Z3K3 1410 aa10.07□□□□□ -0.8
RTF1-204ENST00000558117 MMP20O60882 483 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 PDGFAP04085 211 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 CPB1P15086 417 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 CEBPAP49715 358 aaPredicted RBP10.06□□□□□ -0.8
RTF1-204ENST00000558117 PIP4K2BP78356 416 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 ARHGAP4P98171 946 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
RTF1-204ENST00000558117 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 ZNF438Q7Z4V0 828 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 UHRF1BP1Q6BDS2 1440 aa10.06□□□□□ -0.8
RTF1-204ENST00000558117 FRMPD1Q5SYB0 1578 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 LILRB5O75023 590 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
RTF1-204ENST00000558117 SOX18P35713 384 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 RASSF7Q02833 373 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 MICALL1Q8N3F8 863 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 GGNBP2Q9H3C7 697 aa10.05□□□□□ -0.8
RTF1-204ENST00000558117 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
RTF1-204ENST00000558117 ARHGEF40Q8TER5 1519 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 A6NHS1 94 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
RTF1-204ENST00000558117 GHRHP01286 108 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
RTF1-204ENST00000558117 USP5P45974 858 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 ELMSAN1Q6PJG2 1045 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 NUDT8Q8WV74 236 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 NSUN5Q96P11 429 aaKnown RBP10.04□□□□□ -0.8
RTF1-204ENST00000558117 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
RTF1-204ENST00000558117 NAGPAQ9UK23 515 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
RTF1-204ENST00000558117 SPDYE3A6NKU9 549 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 EHHADHQ08426 723 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 MLECQ14165 292 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 HFE2Q6ZVN8 426 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 TMEM151AQ8N4L1 468 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 FANCAO15360 1455 aa10.03□□□□□ -0.8
RTF1-204ENST00000558117 NCOA1Q15788 1441 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 ZBTB42B2RXF5 422 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 GDF11O95390 407 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 OR13H1Q8NG92 308 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 FRRS1LQ9P0K9 344 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
RTF1-204ENST00000558117 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
RTF1-204ENST00000558117 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
RTF1-204ENST00000558117 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
RTF1-204ENST00000558117 ALYREFQ86V81 257 aaKnown RBP10.01□□□□□ -0.81
RTF1-204ENST00000558117 SPACA7Q96KW9 195 aa10.01□□□□□ -0.81
RTF1-204ENST00000558117 SIGLEC1Q9BZZ2 1709 aa10.01□□□□□ -0.81
RTF1-204ENST00000558117 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
RTF1-204ENST00000558117 LOC102724428A0A0B4J2F2 783 aa10□□□□□ -0.81
RTF1-204ENST00000558117 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
RTF1-204ENST00000558117 NDUFB5O43674 189 aa10□□□□□ -0.81
RTF1-204ENST00000558117 TOM1O60784 492 aa10□□□□□ -0.81
RTF1-204ENST00000558117 HOXD8P13378 290 aaPredicted RBP10□□□□□ -0.81
RTF1-204ENST00000558117 SIK1P57059 783 aa10□□□□□ -0.81
RTF1-204ENST00000558117 HYAL2Q12891 473 aa10□□□□□ -0.81
RTF1-204ENST00000558117 PERM1Q5SV97 790 aa10□□□□□ -0.81
RTF1-204ENST00000558117 PLVAPQ9BX97 442 aa10□□□□□ -0.81
RTF1-204ENST00000558117 SUV39H2Q9H5I1 410 aa10□□□□□ -0.81
RTF1-204ENST00000558117 TMEM63CQ9P1W3 806 aa10□□□□□ -0.81
RTF1-204ENST00000558117 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
RTF1-204ENST00000558117 TRIM11Q96F44 468 aa9.99□□□□□ -0.81
RTF1-204ENST00000558117 LPIN3Q9BQK8 851 aa9.99□□□□□ -0.81
RTF1-204ENST00000558117 SMG9Q9H0W8 520 aaKnown RBP9.99□□□□□ -0.81
RTF1-204ENST00000558117 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
RTF1-204ENST00000558117 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
RTF1-204ENST00000558117 NEO1Q92859 1461 aa9.98□□□□□ -0.81
RTF1-204ENST00000558117 J3QW42 95 aa9.98□□□□□ -0.81
RTF1-204ENST00000558117 PRRT3Q5FWE3 981 aa9.98□□□□□ -0.81
RTF1-204ENST00000558117 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
RTF1-204ENST00000558117 GSK3AP49840 483 aa9.97□□□□□ -0.81
RTF1-204ENST00000558117 GJD3Q8N144 294 aa9.97□□□□□ -0.81
RTF1-204ENST00000558117 PLD4Q96BZ4 506 aa9.97□□□□□ -0.81
RTF1-204ENST00000558117 DCAF5Q96JK2 942 aa9.97□□□□□ -0.81
RTF1-204ENST00000558117 SETD1BQ9UPS6 1966 aaKnown RBP9.96□□□□□ -0.81
RTF1-204ENST00000558117 NID1P14543 1247 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 CES1P23141 567 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 TRAPPC3LQ5T215 181 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 NCAPG2Q86XI2 1143 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 SNX29Q8TEQ0 813 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 PMEPA1Q969W9 287 aa9.96□□□□□ -0.82
RTF1-204ENST00000558117 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms