RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 GJD3Q8N144 294 aa6.91□□□□□ -1.3
CRNDE-204ENST00000558031 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
CRNDE-204ENST00000558031 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
CRNDE-204ENST00000558031 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 DLL1O00548 723 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 EREGO14944 169 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 CDC27P30260 824 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 ECM1Q16610 540 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
CRNDE-204ENST00000558031 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
CRNDE-204ENST00000558031 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
CRNDE-204ENST00000558031 TRPA1O75762 1119 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 PTPRAP18433 802 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 CDC25BP30305 580 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
CRNDE-204ENST00000558031 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
CRNDE-204ENST00000558031 NFKBIEO00221 500 aa6.88□□□□□ -1.31
CRNDE-204ENST00000558031 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
CRNDE-204ENST00000558031 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-204ENST00000558031 CCER1Q8TC90 406 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-204ENST00000558031 WFDC12Q8WWY7 111 aa6.88□□□□□ -1.31
CRNDE-204ENST00000558031 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
CRNDE-204ENST00000558031 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
CRNDE-204ENST00000558031 FAM177BA6PVY3 158 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 EPHA1P21709 976 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 NOS3P29474 1203 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
CRNDE-204ENST00000558031 NKAPLQ5M9Q1 402 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
CRNDE-204ENST00000558031 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-204ENST00000558031 NDUFB5O43674 189 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 EDN3P14138 238 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 OSMRQ99650 979 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
CRNDE-204ENST00000558031 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 AMOTL2Q9Y2J4 779 aa6.86□□□□□ -1.31
CRNDE-204ENST00000558031 FSCN2O14926 492 aa6.85□□□□□ -1.31
CRNDE-204ENST00000558031 ALX3O95076 343 aa6.85□□□□□ -1.31
CRNDE-204ENST00000558031 POLR3DP05423 398 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-204ENST00000558031 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-204ENST00000558031 TP53INP1Q96A56 240 aa6.85□□□□□ -1.31
CRNDE-204ENST00000558031 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
CRNDE-204ENST00000558031 AKTIPQ9H8T0 292 aa6.85□□□□□ -1.31
CRNDE-204ENST00000558031 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
CRNDE-204ENST00000558031 H3BRJ5 948 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 DYRK3O43781 588 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 BRD1O95696 1058 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 CD68P34810 354 aaPredicted RBP6.84□□□□□ -1.31
CRNDE-204ENST00000558031 CABP4P57796 275 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
CRNDE-204ENST00000558031 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
CRNDE-204ENST00000558031 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 LATS2Q9NRM7 1088 aa6.84□□□□□ -1.31
CRNDE-204ENST00000558031 TM4SF5O14894 197 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 ITGB7P26010 798 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 PEAR1Q5VY43 1037 aaPredicted RBP6.83□□□□□ -1.32
CRNDE-204ENST00000558031 KLHL23Q8NBE8 558 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 SEC31BQ9NQW1 1179 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
CRNDE-204ENST00000558031 SOWAHDA6NJG2 315 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 WISP1O95388 367 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 PDIA4P13667 645 aaKnown RBP6.82□□□□□ -1.32
CRNDE-204ENST00000558031 PIP4K2BP78356 416 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
CRNDE-204ENST00000558031 AGGF1Q8N302 714 aaeCLIP6.82□□□□□ -1.32
CRNDE-204ENST00000558031 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 WNT8BQ93098 351 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 KLHDC7BQ96G42 594 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
CRNDE-204ENST00000558031 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
CRNDE-204ENST00000558031 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
CRNDE-204ENST00000558031 NEFLP07196 543 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 ACAD11Q709F0 780 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 SLC7A3Q8WY07 619 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 BSNDQ8WZ55 320 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 CITED4Q96RK1 184 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
CRNDE-204ENST00000558031 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
CRNDE-204ENST00000558031 ADAM11O75078 769 aa6.8□□□□□ -1.32
CRNDE-204ENST00000558031 GLB1P16278 677 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms