RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 CHPF2Q9P2E5 772 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 CYP2E1P05181 493 aaPredicted RBP9.6□□□□□ -0.87
ZEB1-210ENST00000557827 GYS2P54840 703 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 WDR4P57081 412 aaKnown RBP9.6□□□□□ -0.87
ZEB1-210ENST00000557827 LMNB2Q03252 620 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 ARSHQ5FYA8 562 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 ARSJQ5FYB0 599 aaPredicted RBP9.6□□□□□ -0.87
ZEB1-210ENST00000557827 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 CCDC81Q6ZN84 652 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 HOMER1Q86YM7 354 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 SLITRK4Q8IW52 837 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
ZEB1-210ENST00000557827 CRKP46108 304 aa9.59□□□□□ -0.87
ZEB1-210ENST00000557827 TYRO3Q06418 890 aa9.59□□□□□ -0.87
ZEB1-210ENST00000557827 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
ZEB1-210ENST00000557827 KIAA0907Q7Z7F0 614 aaPredicted RBP9.59□□□□□ -0.87
ZEB1-210ENST00000557827 POU4F2Q12837 409 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
ZEB1-210ENST00000557827 GRIN2CQ14957 1233 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 IFFO2Q5TF58 517 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 FAM169BQ8N8A8 192 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 CEP63Q96MT8 703 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 INSM2Q96T92 566 aaPredicted RBP9.58□□□□□ -0.88
ZEB1-210ENST00000557827 C11orf16Q9NQ32 467 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 KANSL3Q9P2N6 904 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 SALL4Q9UJQ4 1053 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 PPT2Q9UMR5 302 aa9.58□□□□□ -0.88
ZEB1-210ENST00000557827 CELA3AP09093 270 aa9.57□□□□□ -0.88
ZEB1-210ENST00000557827 TIMP2P16035 220 aa9.57□□□□□ -0.88
ZEB1-210ENST00000557827 LIN7BQ9HAP6 207 aa9.57□□□□□ -0.88
ZEB1-210ENST00000557827 PDPK1O15530 556 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 DDR2Q16832 855 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 FAM196AQ6ZSG2 479 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 TCF12Q99081 682 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 ZFYVE1Q9HBF4 777 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 TMEM260Q9NX78 707 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 G3BP2Q9UN86 482 aaKnown RBP9.56□□□□□ -0.88
ZEB1-210ENST00000557827 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
ZEB1-210ENST00000557827 ROBO2Q9HCK4 1378 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
ZEB1-210ENST00000557827 GIPRP48546 466 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 EIF6P56537 245 aaKnown RBP9.55□□□□□ -0.88
ZEB1-210ENST00000557827 SQSTM1Q13501 440 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 RASGRF1Q13972 1273 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 HSP90AB2PQ58FF8 381 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
ZEB1-210ENST00000557827 PLEKHD1A6NEE1 506 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 SASH3O75995 380 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 S100BP04271 92 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-210ENST00000557827 MSX1P28360 303 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 SLC19A1P41440 591 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 MASP1P48740 699 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-210ENST00000557827 ACTR10Q9NZ32 417 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 RIPOR2Q9Y4F9 1068 aa9.54□□□□□ -0.88
ZEB1-210ENST00000557827 PHF20L1A8MW92 1017 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 SPINT1O43278 529 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 PRICKLE2Q7Z3G6 844 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 CCNJLQ8IV13 435 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 OR13H1Q8NG92 308 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
ZEB1-210ENST00000557827 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 TSEN34Q9BSV6 310 aaKnown RBP9.53□□□□□ -0.88
ZEB1-210ENST00000557827 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 GJA3Q9Y6H8 435 aa9.53□□□□□ -0.88
ZEB1-210ENST00000557827 LOC102724159A0A0B4J2E5 919 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 TLR3O15455 904 aaKnown RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 TRIM37O94972 964 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 MAP4K4O95819 1239 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 PDGFRBP09619 1106 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 PWP2Q15269 919 aaKnown RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 NECAB3Q96P71 396 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 FEZ1Q99689 392 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 LRRC3Q9BY71 257 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 ZCCHC2Q9C0B9 1178 aaKnown RBP9.52□□□□□ -0.89
ZEB1-210ENST00000557827 BRD7Q9NPI1 651 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
ZEB1-210ENST00000557827 ENC1O14682 589 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 MMP20O60882 483 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 F13A1P00488 732 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
ZEB1-210ENST00000557827 MCM4P33991 863 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 RPS26P62854 115 aaKnown RBP9.51□□□□□ -0.89
ZEB1-210ENST00000557827 TKFCQ3LXA3 575 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 FBXW10Q5XX13 1052 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 TRIM42Q8IWZ5 723 aa9.51□□□□□ -0.89
ZEB1-210ENST00000557827 FERD3LQ96RJ6 166 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms