RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ANGEL2Q5VTE6 544 aaKnown RBP21.21■□□□□ 0.99
NEK9-211ENST00000557673 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
NEK9-211ENST00000557673 PITPNM2Q9BZ72 1349 aa21.21■□□□□ 0.99
NEK9-211ENST00000557673 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
NEK9-211ENST00000557673 CSRNP1Q96S65 589 aa21.2■□□□□ 0.98
NEK9-211ENST00000557673 MYOZ2Q9NPC6 264 aa21.2■□□□□ 0.98
NEK9-211ENST00000557673 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
NEK9-211ENST00000557673 COL4A1P02462 1669 aa21.2■□□□□ 0.98
NEK9-211ENST00000557673 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
NEK9-211ENST00000557673 G2E3Q7L622 706 aa21.19■□□□□ 0.98
NEK9-211ENST00000557673 CCDC85AQ96PX6 553 aaPredicted RBP21.19■□□□□ 0.98
NEK9-211ENST00000557673 GMLQ99445 158 aa21.19■□□□□ 0.98
NEK9-211ENST00000557673 NEXNQ0ZGT2 675 aa21.18■□□□□ 0.98
NEK9-211ENST00000557673 OGFOD1Q8N543 542 aa21.18■□□□□ 0.98
NEK9-211ENST00000557673 ASTN2O75129 1339 aaPredicted RBP21.18■□□□□ 0.98
NEK9-211ENST00000557673 SCN9AQ15858 1988 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 SLC4A2P04920 1241 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 CTSWP56202 376 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 KSR2Q6VAB6 950 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 TRMT2AQ8IZ69 625 aaKnown RBP21.17■□□□□ 0.98
NEK9-211ENST00000557673 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
NEK9-211ENST00000557673 JARID2Q92833 1246 aaPredicted RBP21.17■□□□□ 0.98
NEK9-211ENST00000557673 BSDC1Q9NW68 430 aaPredicted RBP21.17■□□□□ 0.98
NEK9-211ENST00000557673 VAMP4O75379 141 aa21.16■□□□□ 0.98
NEK9-211ENST00000557673 MMP14P50281 582 aa21.16■□□□□ 0.98
NEK9-211ENST00000557673 MYO3BQ8WXR4 1341 aa21.15■□□□□ 0.98
NEK9-211ENST00000557673 RASAL3Q86YV0 1011 aa21.15■□□□□ 0.98
NEK9-211ENST00000557673 MED23Q9ULK4 1368 aa21.14■□□□□ 0.98
NEK9-211ENST00000557673 IGKV5-2P06315 115 aa21.14■□□□□ 0.97
NEK9-211ENST00000557673 CTU1Q7Z7A3 348 aaKnown RBP21.14■□□□□ 0.97
NEK9-211ENST00000557673 TTLL11Q8NHH1 800 aa21.14■□□□□ 0.97
NEK9-211ENST00000557673 MINPP1Q9UNW1 487 aa21.14■□□□□ 0.97
NEK9-211ENST00000557673 AKAP11Q9UKA4 1901 aa21.14■□□□□ 0.97
NEK9-211ENST00000557673 NF2P35240 595 aa21.13■□□□□ 0.97
NEK9-211ENST00000557673 FLIIQ13045 1269 aa21.13■□□□□ 0.97
NEK9-211ENST00000557673 COA1Q9GZY4 146 aa21.13■□□□□ 0.97
NEK9-211ENST00000557673 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
NEK9-211ENST00000557673 CWF19L2Q2TBE0 894 aaKnown RBP21.12■□□□□ 0.97
NEK9-211ENST00000557673 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
NEK9-211ENST00000557673 LEMD3Q9Y2U8 911 aa21.12■□□□□ 0.97
NEK9-211ENST00000557673 PAPPA2Q9BXP8 1791 aa21.12■□□□□ 0.97
NEK9-211ENST00000557673 IGHMBP2P38935 993 aaKnown RBP21.11■□□□□ 0.97
NEK9-211ENST00000557673 TTLL12Q14166 644 aaPredicted RBP21.11■□□□□ 0.97
NEK9-211ENST00000557673 PKN2Q16513 984 aaKnown RBP21.11■□□□□ 0.97
NEK9-211ENST00000557673 DACT2Q5SW24 774 aa21.11■□□□□ 0.97
NEK9-211ENST00000557673 GREM2Q9H772 168 aa21.11■□□□□ 0.97
NEK9-211ENST00000557673 PSME4Q14997 1843 aa21.11■□□□□ 0.97
NEK9-211ENST00000557673 NEURL1BA8MQ27 555 aa21.1■□□□□ 0.97
NEK9-211ENST00000557673 FKBP5Q13451 457 aaPredicted RBP21.1■□□□□ 0.97
NEK9-211ENST00000557673 NBPF9Q3BBW0 867 aa21.1■□□□□ 0.97
NEK9-211ENST00000557673 FBXW7Q969H0 707 aa21.1■□□□□ 0.97
NEK9-211ENST00000557673 UBE2Q2LH0YL09 131 aa21.09■□□□□ 0.97
NEK9-211ENST00000557673 ANKRD2Q9GZV1 360 aa21.09■□□□□ 0.97
NEK9-211ENST00000557673 HDAC9Q9UKV0 1011 aa21.09■□□□□ 0.97
NEK9-211ENST00000557673 WNT10BO00744 389 aa21.08■□□□□ 0.97
NEK9-211ENST00000557673 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
NEK9-211ENST00000557673 H7C1W4 665 aa21.07■□□□□ 0.96
NEK9-211ENST00000557673 SOX10P56693 466 aa21.07■□□□□ 0.96
NEK9-211ENST00000557673 TTLL5Q6EMB2 1281 aa21.07■□□□□ 0.96
NEK9-211ENST00000557673 UBE3BQ7Z3V4 1068 aa21.07■□□□□ 0.96
NEK9-211ENST00000557673 DNAAF4Q8WXU2 420 aa21.07■□□□□ 0.96
NEK9-211ENST00000557673 MYH3P11055 1940 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 WTIPA6NIX2 430 aaPredicted RBP21.06■□□□□ 0.96
NEK9-211ENST00000557673 TM4SF4P48230 202 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 SREBF2Q12772 1141 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 NOM1Q5C9Z4 860 aaKnown RBP21.06■□□□□ 0.96
NEK9-211ENST00000557673 PRAMEF18Q5VWM3 479 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 ARMC9Q7Z3E5 817 aa21.06■□□□□ 0.96
NEK9-211ENST00000557673 APOBEC3FQ8IUX4 373 aaKnown RBP21.06■□□□□ 0.96
NEK9-211ENST00000557673 SCAF8Q9UPN6 1271 aaKnown RBP21.06■□□□□ 0.96
NEK9-211ENST00000557673 ZNF804BA4D1E1 1349 aa21.05■□□□□ 0.96
NEK9-211ENST00000557673 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
NEK9-211ENST00000557673 ITGA6P23229 1130 aa21.05■□□□□ 0.96
NEK9-211ENST00000557673 MXD3Q9BW11 206 aa21.05■□□□□ 0.96
NEK9-211ENST00000557673 PLA2G12BQ9BX93 195 aa21.05■□□□□ 0.96
NEK9-211ENST00000557673 PDE4DIPQ5VU43 2346 aa21.04■□□□□ 0.96
NEK9-211ENST00000557673 F6X3S4 739 aa21.04■□□□□ 0.96
NEK9-211ENST00000557673 KCNJ4P48050 445 aa21.04■□□□□ 0.96
NEK9-211ENST00000557673 GCKRQ14397 625 aa21.04■□□□□ 0.96
NEK9-211ENST00000557673 TBC1D8O95759 1140 aa21.03■□□□□ 0.96
NEK9-211ENST00000557673 TXNRD3Q86VQ6 643 aa21.03■□□□□ 0.96
NEK9-211ENST00000557673 LINS1Q8NG48 757 aa21.03■□□□□ 0.96
NEK9-211ENST00000557673 ZNF296Q8WUU4 475 aaPredicted RBP21.03■□□□□ 0.96
NEK9-211ENST00000557673 HPS5Q9UPZ3 1129 aa21.03■□□□□ 0.96
NEK9-211ENST00000557673 SPEF2Q9C093 1822 aa21.02■□□□□ 0.96
NEK9-211ENST00000557673 TNRC18O15417 2968 aaPredicted RBP21.02■□□□□ 0.96
NEK9-211ENST00000557673 SASH1O94885 1247 aa21.02■□□□□ 0.96
NEK9-211ENST00000557673 KIAA0825Q8IV33 1275 aa21.02■□□□□ 0.96
NEK9-211ENST00000557673 YTHDC1Q96MU7 727 aaKnown RBP21.02■□□□□ 0.96
NEK9-211ENST00000557673 PCDH10Q9P2E7 1040 aa21.02■□□□□ 0.96
NEK9-211ENST00000557673 GPR25O00155 361 aa21.01■□□□□ 0.95
NEK9-211ENST00000557673 CSF1RP07333 972 aa21.01■□□□□ 0.95
NEK9-211ENST00000557673 GTF2IP78347 998 aa21.01■□□□□ 0.95
NEK9-211ENST00000557673 ALDH1A1P00352 501 aa21■□□□□ 0.95
NEK9-211ENST00000557673 CASP7P55210 303 aa21■□□□□ 0.95
NEK9-211ENST00000557673 PTPN12Q05209 780 aaKnown RBP21■□□□□ 0.95
NEK9-211ENST00000557673 CFHR5Q9BXR6 569 aa21■□□□□ 0.95
NEK9-211ENST00000557673 ANKRD18BA2A2Z9 1011 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms