RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
SLIRP-211ENST00000557623 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
SLIRP-211ENST00000557623 RBM46Q8TBY0 533 aaKnown RBP15.65■□□□□ 0.1
SLIRP-211ENST00000557623 ECE2O60344 883 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 LMOD1P29536 600 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-211ENST00000557623 KCNJ4P48050 445 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 CXCL9Q07325 125 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
SLIRP-211ENST00000557623 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 ZNF594Q96JF6 807 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-211ENST00000557623 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-211ENST00000557623 DBNDD1Q9H9R9 158 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 HACL1Q9UJ83 578 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
SLIRP-211ENST00000557623 YDJCA8MPS7 323 aa15.63■□□□□ 0.09
SLIRP-211ENST00000557623 MS4A1P11836 297 aa15.63■□□□□ 0.09
SLIRP-211ENST00000557623 DOK7Q18PE1 504 aa15.63■□□□□ 0.09
SLIRP-211ENST00000557623 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
SLIRP-211ENST00000557623 MEIS3Q99687 375 aa15.63■□□□□ 0.09
SLIRP-211ENST00000557623 SCN9AQ15858 1988 aa15.63■□□□□ 0.09
SLIRP-211ENST00000557623 RAD17O75943 681 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 FSTL1Q12841 308 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
SLIRP-211ENST00000557623 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
SLIRP-211ENST00000557623 RCAN3Q9UKA8 241 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
SLIRP-211ENST00000557623 MROH5Q6ZUA9 1318 aa15.62■□□□□ 0.09
SLIRP-211ENST00000557623 EPHX2P34913 555 aa15.61■□□□□ 0.09
SLIRP-211ENST00000557623 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
SLIRP-211ENST00000557623 PNMA8AQ86V59 439 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-211ENST00000557623 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
SLIRP-211ENST00000557623 TAF5LO75529 589 aa15.6■□□□□ 0.09
SLIRP-211ENST00000557623 SCNN1DP51172 638 aa15.6■□□□□ 0.09
SLIRP-211ENST00000557623 HELBQ8NG08 1087 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-211ENST00000557623 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
SLIRP-211ENST00000557623 RIPOR2Q9Y4F9 1068 aa15.6■□□□□ 0.09
SLIRP-211ENST00000557623 PSMD14O00487 310 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 PLIN1O60240 522 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 GNAI2P04899 355 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-211ENST00000557623 GSE1Q14687 1217 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
SLIRP-211ENST00000557623 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
SLIRP-211ENST00000557623 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 ADAMTSL1Q8N6G6 1762 aa15.59■□□□□ 0.09
SLIRP-211ENST00000557623 WTIPA6NIX2 430 aaPredicted RBP15.58■□□□□ 0.08
SLIRP-211ENST00000557623 RPS12P25398 132 aaKnown RBP15.58■□□□□ 0.08
SLIRP-211ENST00000557623 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
SLIRP-211ENST00000557623 CLCN6P51797 869 aa15.58■□□□□ 0.08
SLIRP-211ENST00000557623 UBE4AQ14139 1066 aa15.58■□□□□ 0.08
SLIRP-211ENST00000557623 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
SLIRP-211ENST00000557623 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
SLIRP-211ENST00000557623 DPF2Q92785 391 aa15.58■□□□□ 0.08
SLIRP-211ENST00000557623 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 EYA2O00167 538 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 EPS15P42566 896 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 PTPN12Q05209 780 aaKnown RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 LRRC24Q50LG9 513 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 METTL24Q5JXM2 366 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 TXNRD3Q86VQ6 643 aa15.57■□□□□ 0.08
SLIRP-211ENST00000557623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 ADARB2Q9NS39 739 aaKnown RBP15.57■□□□□ 0.08
SLIRP-211ENST00000557623 H7C1D1 291 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 CIAO1O76071 339 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 RLBP1P12271 317 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 MTX1Q13505 466 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 ZNF804AQ7Z570 1209 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 CNOT7Q9UIV1 285 aaKnown RBP15.56■□□□□ 0.08
SLIRP-211ENST00000557623 ZNF609O15014 1411 aa15.56■□□□□ 0.08
SLIRP-211ENST00000557623 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 PDE8BO95263 885 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 HSPA6P17066 643 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 KLRK1P26718 216 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 RSBN1LQ6PCB5 846 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-211ENST00000557623 AGBL3Q8NEM8 1001 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 PHF12Q96QT6 1004 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 MYH13Q9UKX3 1938 aa15.55■□□□□ 0.08
SLIRP-211ENST00000557623 MYO3BQ8WXR4 1341 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 SNAP23O00161 211 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-211ENST00000557623 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 MICALL2Q8IY33 904 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
SLIRP-211ENST00000557623 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
SLIRP-211ENST00000557623 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms