RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZKSCAN2Q63HK3 967 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
PSEN1-223ENST00000557511 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
PSEN1-223ENST00000557511 ANKRD2Q9GZV1 360 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 BSDC1Q9NW68 430 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-223ENST00000557511 GGA1Q9UJY5 639 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 CACNA1SQ13698 1873 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 RTL9Q8NET4 1388 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 XDHP47989 1333 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 IQCA1LA6NCM1 817 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 CSF1RP07333 972 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 MS4A1P11836 297 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-223ENST00000557511 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 CASP7P55210 303 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 AOC3Q16853 763 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 RTFDC1Q9BY42 306 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-223ENST00000557511 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
PSEN1-223ENST00000557511 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-223ENST00000557511 KIF3CO14782 793 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 BCAR3O75815 825 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 UFL1O94874 794 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 GNAI3P08754 354 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 LMOD1P29536 600 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-223ENST00000557511 GPSM2P81274 684 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
PSEN1-223ENST00000557511 DDX60Q8IY21 1712 aaKnown RBP10.43□□□□□ -0.74
PSEN1-223ENST00000557511 LAMB2P55268 1798 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 DDNO94850 711 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-223ENST00000557511 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-223ENST00000557511 PRELPP51888 382 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 FOXO4P98177 505 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 TNIP1Q15025 636 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 LDHAL6AQ6ZMR3 332 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-223ENST00000557511 TBC1D16Q8TBP0 767 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 SUCLG2Q96I99 432 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
PSEN1-223ENST00000557511 NMRK2Q9NPI5 230 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 PODXL2Q9NZ53 605 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 ZNRF3Q9ULT6 936 aa10.42□□□□□ -0.74
PSEN1-223ENST00000557511 UTYO14607 1347 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 FER1L6Q2WGJ9 1857 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 FZD9O00144 591 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 TOMM70O94826 608 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 CIAPIN1Q6FI81 312 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 GPC2Q8N158 579 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
PSEN1-223ENST00000557511 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 LEMD3Q9Y2U8 911 aa10.41□□□□□ -0.74
PSEN1-223ENST00000557511 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
PSEN1-223ENST00000557511 ST18O60284 1047 aa10.4□□□□□ -0.74
PSEN1-223ENST00000557511 TRIM27P14373 513 aa10.4□□□□□ -0.74
PSEN1-223ENST00000557511 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
PSEN1-223ENST00000557511 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
PSEN1-223ENST00000557511 USP44Q9H0E7 712 aa10.4□□□□□ -0.74
PSEN1-223ENST00000557511 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
PSEN1-223ENST00000557511 POLLQ9UGP5 575 aa10.4□□□□□ -0.74
PSEN1-223ENST00000557511 HACL1Q9UJ83 578 aa10.4□□□□□ -0.74
PSEN1-223ENST00000557511 UTRNP46939 3433 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 ZNF541Q9H0D2 1346 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 PLIN1O60240 522 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 ECE2O60344 883 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 C1QTNF8P60827 252 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 CHRNDQ07001 517 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 EPHA10Q5JZY3 1008 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 ITPRIPQ8IWB1 547 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 CHMP4BQ9H444 224 aaKnown RBP10.39□□□□□ -0.75
PSEN1-223ENST00000557511 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 SNED1Q8TER0 1413 aa10.39□□□□□ -0.75
PSEN1-223ENST00000557511 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 SBF1O95248 1867 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 ZNF804BA4D1E1 1349 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 MROH5Q6ZUA9 1318 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 RAD17O75943 681 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 GNAI2P04899 355 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-223ENST00000557511 FOXK1P85037 733 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 DSG2Q14126 1118 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-223ENST00000557511 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-223ENST00000557511 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
PSEN1-223ENST00000557511 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-223ENST00000557511 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
PSEN1-223ENST00000557511 CXCL9Q07325 125 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 FSTL1Q12841 308 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
PSEN1-223ENST00000557511 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 ZNF804AQ7Z570 1209 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 PODNQ7Z5L7 613 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms